Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC4.34□□□□□ -1.71
LHX6Q9UPM6 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.34□□□□□ -1.71
LHX6Q9UPM6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.34□□□□□ -1.71
LHX6Q9UPM6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LHX6Q9UPM6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
LHX6Q9UPM6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LHX6Q9UPM6 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LHX6Q9UPM6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
LHX6Q9UPM6 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LHX6Q9UPM6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LHX6Q9UPM6 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LHX6Q9UPM6 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.33□□□□□ -1.72
LHX6Q9UPM6 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.33□□□□□ -1.72
LHX6Q9UPM6 RNU6-457P-201ENST00000363999 107 ntBASIC4.33□□□□□ -1.72
LHX6Q9UPM6 SNORA1.1-201ENST00000364671 133 ntBASIC4.33□□□□□ -1.72
LHX6Q9UPM6 RNU1-82P-201ENST00000390851 165 ntBASIC4.33□□□□□ -1.72
LHX6Q9UPM6 AC104333.2-201ENST00000422630 192 ntBASIC4.33□□□□□ -1.72
LHX6Q9UPM6 AL139247.1-201ENST00000422768 325 ntBASIC4.33□□□□□ -1.72
LHX6Q9UPM6 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.33□□□□□ -1.72
LHX6Q9UPM6 HMGN2P18-201ENST00000450680 270 ntBASIC4.33□□□□□ -1.72
LHX6Q9UPM6 SNORA4.4-201ENST00000515921 135 ntBASIC4.33□□□□□ -1.72
LHX6Q9UPM6 SNORA74C-1-201ENST00000580726 201 ntBASIC4.33□□□□□ -1.72
LHX6Q9UPM6 AC103810.7-201ENST00000607821 91 ntBASIC4.33□□□□□ -1.72
LHX6Q9UPM6 AC019176.2-201ENST00000611579 315 ntBASIC4.33□□□□□ -1.72
LHX6Q9UPM6 AC140479.6-201ENST00000633535 357 ntBASIC4.33□□□□□ -1.72
LHX6Q9UPM6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
LHX6Q9UPM6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.33□□□□□ -1.72
LHX6Q9UPM6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.33□□□□□ -1.72
LHX6Q9UPM6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
LHX6Q9UPM6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
LHX6Q9UPM6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LHX6Q9UPM6 AC073346.2-201ENST00000624724 2058 ntBASIC4.33□□□□□ -1.72
LHX6Q9UPM6 MFSD8-242ENST00000641690 4199 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.32□□□□□ -1.72
LHX6Q9UPM6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LHX6Q9UPM6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LHX6Q9UPM6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LHX6Q9UPM6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LHX6Q9UPM6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LHX6Q9UPM6 MIR342-201ENST00000362212 99 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 SNORA31-201ENST00000362607 130 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 SNORD77B-201ENST00000391112 67 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 RNA5SP239-201ENST00000410218 129 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 SNX2P2-201ENST00000424553 323 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 HMGN2P34-201ENST00000437647 269 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 AL049873.1-201ENST00000480540 376 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 RPL30P14-201ENST00000482744 348 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 RN7SL558P-201ENST00000497468 299 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 RNU7-128P-201ENST00000517247 62 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LHX6Q9UPM6 AC105129.1-201ENST00000560250 297 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 MIR4513-201ENST00000581077 86 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.32□□□□□ -1.72
LHX6Q9UPM6 SNORA51-201ENST00000606420 132 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LHX6Q9UPM6 AC021613.1-201ENST00000623880 111 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.32□□□□□ -1.72
LHX6Q9UPM6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LHX6Q9UPM6 AC011266.1-201ENST00000624119 3569 ntBASIC4.32□□□□□ -1.72
LHX6Q9UPM6 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.32□□□□□ -1.72
LHX6Q9UPM6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 AC008264.2-201ENST00000610193 3731 ntBASIC4.31□□□□□ -1.72
LHX6Q9UPM6 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 RNA5SP119-201ENST00000362715 117 ntBASIC4.31□□□□□ -1.72
LHX6Q9UPM6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 RNU6-198P-201ENST00000384258 104 ntBASIC4.31□□□□□ -1.72
LHX6Q9UPM6 RNU6-524P-201ENST00000384270 107 ntBASIC4.31□□□□□ -1.72
LHX6Q9UPM6 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.31□□□□□ -1.72
LHX6Q9UPM6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 Z98742.2-201ENST00000431564 187 ntBASIC4.31□□□□□ -1.72
LHX6Q9UPM6 RPL32P34-201ENST00000486380 400 ntBASIC4.31□□□□□ -1.72
LHX6Q9UPM6 RNU6-856P-201ENST00000516959 98 ntBASIC4.31□□□□□ -1.72
LHX6Q9UPM6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 SCARNA15.3-201ENST00000626315 122 ntBASIC4.31□□□□□ -1.72
LHX6Q9UPM6 SCARNA4.1-201ENST00000628597 123 ntBASIC4.31□□□□□ -1.72
LHX6Q9UPM6 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LHX6Q9UPM6 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LHX6Q9UPM6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LHX6Q9UPM6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.3□□□□□ -1.72
LHX6Q9UPM6 POLR2J4-204ENST00000418424 324 ntBASIC4.3□□□□□ -1.72
LHX6Q9UPM6 AC107083.1-201ENST00000439643 279 ntBASIC4.3□□□□□ -1.72
LHX6Q9UPM6 AL049830.1-201ENST00000468034 425 ntBASIC4.3□□□□□ -1.72
LHX6Q9UPM6 AC004223.1-201ENST00000479840 271 ntBASIC4.3□□□□□ -1.72
LHX6Q9UPM6 AC093729.1-201ENST00000513074 128 ntBASIC4.3□□□□□ -1.72
LHX6Q9UPM6 AC108729.3-201ENST00000513484 108 ntBASIC4.3□□□□□ -1.72
LHX6Q9UPM6 RN7SKP83-201ENST00000516512 178 ntBASIC4.3□□□□□ -1.72
LHX6Q9UPM6 AC103810.1-201ENST00000579873 453 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms