Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 MIR300-201ENST00000401138 83 ntBASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 MIR1283-1-201ENST00000408494 87 ntBASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 RNU6-855P-201ENST00000410395 104 ntBASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 AL451074.5-201ENST00000415894 435 ntBASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 RPL30P4-201ENST00000429309 333 ntBASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 SCARNA3-201ENST00000517097 143 ntBASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 RNU6-586P-201ENST00000517265 104 ntBASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 AL713866.2-201ENST00000603579 219 ntBASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 AC104465.1-201ENST00000611365 139 ntBASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 MIR7112-201ENST00000616126 65 ntBASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BRPF3Q9ULD4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.77□□□□□ -1.81
BRPF3Q9ULD4 Y_RNA.7-201ENST00000362352 102 ntBASIC3.77□□□□□ -1.81
BRPF3Q9ULD4 Y_RNA.287-201ENST00000364853 94 ntBASIC3.77□□□□□ -1.81
BRPF3Q9ULD4 RNU4-17P-201ENST00000365598 141 ntBASIC3.77□□□□□ -1.81
BRPF3Q9ULD4 RNU6-804P-201ENST00000384286 107 ntBASIC3.77□□□□□ -1.81
BRPF3Q9ULD4 AL139095.1-201ENST00000404326 391 ntBASIC3.77□□□□□ -1.81
BRPF3Q9ULD4 RNU6-394P-201ENST00000410735 107 ntBASIC3.77□□□□□ -1.81
BRPF3Q9ULD4 RPL39P40-201ENST00000445481 146 ntBASIC3.77□□□□□ -1.81
BRPF3Q9ULD4 MIR3144-201ENST00000579460 79 ntBASIC3.77□□□□□ -1.81
BRPF3Q9ULD4 MIR3910-1-201ENST00000580936 111 ntBASIC3.77□□□□□ -1.81
BRPF3Q9ULD4 AC013791.1-201ENST00000616619 62 ntBASIC3.77□□□□□ -1.81
BRPF3Q9ULD4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.77□□□□□ -1.81
BRPF3Q9ULD4 AL021368.2-201ENST00000606125 5352 ntBASIC3.77□□□□□ -1.81
BRPF3Q9ULD4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.77□□□□□ -1.81
BRPF3Q9ULD4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
BRPF3Q9ULD4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 Y_RNA.8-201ENST00000362353 102 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 RNU6-234P-201ENST00000365229 104 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 Y_RNA.341-201ENST00000365341 102 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 Y_RNA.368-201ENST00000365547 113 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 SNORA72.4-201ENST00000384174 132 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 MIR7-3-201ENST00000384898 110 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 MIR218-1-201ENST00000384999 110 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 U6atac.2-201ENST00000408644 118 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 RPS12P18-201ENST00000442381 270 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 RNU7-57P-201ENST00000459540 60 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 RPS29P2-201ENST00000479278 136 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 SNORA70.12-201ENST00000516084 153 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 AC100767.1-201ENST00000528178 123 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 MIR3684-201ENST00000579779 74 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 MIR4753-201ENST00000585119 83 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 AC023043.3-201ENST00000593113 385 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 AC134026.1-201ENST00000623249 2239 ntBASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
BRPF3Q9ULD4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 RNU6-1048P-201ENST00000364054 107 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 Y_RNA.238-201ENST00000364441 102 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 MTCO2P33-201ENST00000402100 465 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 RNU2-2P-201ENST00000410396 191 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 RNA5SP120-201ENST00000410900 112 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 RNU6-1135P-201ENST00000411083 103 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 AC074290.1-201ENST00000448883 135 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 RNU2-4P-201ENST00000606190 192 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 MIR92B-201ENST00000607575 96 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 U2.15-201ENST00000611544 191 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 U2.16-201ENST00000613119 191 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 U2.12-201ENST00000613778 191 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 U2.9-201ENST00000615427 191 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 U2.11-201ENST00000616345 191 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 AC084757.4-201ENST00000616350 526 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 U2.2-201ENST00000616535 191 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 U2.3-201ENST00000617785 191 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 U2.19-201ENST00000618602 191 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 RNU2-1-201ENST00000618664 191 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 U2.6-201ENST00000619225 191 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 U2.5-201ENST00000619465 191 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 U2.10-201ENST00000620268 191 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.75□□□□□ -1.81
BRPF3Q9ULD4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 MAPK10-266ENST00000641066 6555 ntBASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 SNORA63.1-201ENST00000362493 131 ntBASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 Y_RNA.310-201ENST00000365063 113 ntBASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 RNY1P5-201ENST00000383890 115 ntBASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 Y_RNA.441-201ENST00000384123 112 ntBASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 Y_RNA.456-201ENST00000384232 111 ntBASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 SNORA19-201ENST00000384737 128 ntBASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 PRSS3P4-201ENST00000453323 162 ntBASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 AC114982.1-201ENST00000469402 321 ntBASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 ATP5EP1-201ENST00000510257 156 ntBASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 RNU7-200P-201ENST00000516105 62 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms