Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 RNU6-856P-201ENST00000516959 98 ntBASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 AP001328.1-201ENST00000528550 176 ntBASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 MIR4438-201ENST00000585271 93 ntBASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 U7.2-201ENST00000607576 63 ntBASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 MFSD8-236ENST00000641509 4050 ntBASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 SNORA63.1-201ENST00000362493 131 ntBASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 Y_RNA.261-201ENST00000364631 102 ntBASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 RNU6-1180P-201ENST00000364935 107 ntBASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 Z98941.1-201ENST00000407764 100 ntBASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 SNORA11.1-201ENST00000408133 129 ntBASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 RNU6-588P-201ENST00000410281 105 ntBASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 AC023449.1-201ENST00000454464 154 ntBASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 AP001486.1-201ENST00000463339 476 ntBASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 PHBP14-201ENST00000512887 367 ntBASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 RNU7-172P-201ENST00000517125 64 ntBASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 AC093331.1-201ENST00000521474 169 ntBASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 MIR5187-201ENST00000583479 76 ntBASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 AC011603.4-201ENST00000611325 277 ntBASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
FOXD3Q9UJU5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 Y_RNA.203-201ENST00000364106 102 ntBASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 Y_RNA.251-201ENST00000364551 99 ntBASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 SNORA70.4-201ENST00000365509 134 ntBASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 RNU6-1080P-201ENST00000383982 107 ntBASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 RNU6-484P-201ENST00000384016 107 ntBASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 SNORA5A-201ENST00000384111 134 ntBASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 RNU2-63P-201ENST00000410792 194 ntBASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 AC025750.2-201ENST00000442609 450 ntBASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 RPS29P12-201ENST00000460178 152 ntBASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 RPS29P21-201ENST00000496272 170 ntBASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 RNU6-1299P-201ENST00000516316 100 ntBASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 AC087499.8-201ENST00000578406 226 ntBASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
FOXD3Q9UJU5 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 Y_RNA.353-201ENST00000365440 108 ntBASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 RNU6-460P-201ENST00000391158 108 ntBASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 AC245102.2-201ENST00000448956 180 ntBASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 AL133162.1-201ENST00000463228 453 ntBASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 AC023141.11-201ENST00000508864 202 ntBASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 RNA5SP153-201ENST00000516498 76 ntBASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 RNU6-126P-201ENST00000516685 103 ntBASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 AC090142.3-201ENST00000519012 385 ntBASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 PRELID2P1-201ENST00000552837 301 ntBASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 AC120024.3-201ENST00000603167 156 ntBASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
FOXD3Q9UJU5 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
FOXD3Q9UJU5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
FOXD3Q9UJU5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
FOXD3Q9UJU5 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 RNU6-834P-201ENST00000362367 110 ntBASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 RNA5SP124-201ENST00000362739 110 ntBASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 DYNLT3P1-201ENST00000378574 347 ntBASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 RNU11-5P-201ENST00000391216 129 ntBASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 MIR1253-201ENST00000408273 105 ntBASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 RPS4XP11-201ENST00000446897 772 ntBASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 RNU4-57P-201ENST00000515980 135 ntBASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 RN7SKP18-201ENST00000516005 275 ntBASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 RNU6-1146P-201ENST00000516282 102 ntBASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 NDUFA5P6-201ENST00000542110 379 ntBASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 AL031274.2-201ENST00000599419 203 ntBASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 AL929325.1-201ENST00000603096 117 ntBASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 U7.8-201ENST00000619968 63 ntBASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
FOXD3Q9UJU5 AC009093.8-201ENST00000641769 292 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms