Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 Y_RNA.720-201ENST00000517166 92 ntBASIC2.17□□□□□ -2.06
PCDH9Q9HC56 AC022616.4-201ENST00000522985 181 ntBASIC2.17□□□□□ -2.06
PCDH9Q9HC56 AC022616.8-201ENST00000533569 253 ntBASIC2.17□□□□□ -2.06
PCDH9Q9HC56 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.17□□□□□ -2.06
PCDH9Q9HC56 AC091544.4-201ENST00000555268 342 ntBASIC2.17□□□□□ -2.06
PCDH9Q9HC56 MIR4659A-201ENST00000580269 81 ntBASIC2.17□□□□□ -2.06
PCDH9Q9HC56 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.17□□□□□ -2.06
PCDH9Q9HC56 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PCDH9Q9HC56 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PCDH9Q9HC56 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
PCDH9Q9HC56 RNU5F-3P-201ENST00000363767 117 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 RNU4-50P-201ENST00000364361 141 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 SNORD87-201ENST00000364849 89 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 RNA5SP160-201ENST00000364866 120 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 Y_RNA.415-201ENST00000384012 112 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 RNU6-1145P-201ENST00000384246 107 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 RNY3P4-201ENST00000384428 101 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 RNU6-1026P-201ENST00000384465 108 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 RNA5SP338-201ENST00000410495 85 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 RN7SKP223-201ENST00000410582 62 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.16□□□□□ -2.06
PCDH9Q9HC56 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.16□□□□□ -2.06
PCDH9Q9HC56 AC009237.7-201ENST00000447357 229 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.16□□□□□ -2.06
PCDH9Q9HC56 ATP5EP1-201ENST00000510257 156 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 RNU6-1045P-201ENST00000516321 107 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 RNU6-107P-201ENST00000516643 102 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 RN7SKP49-201ENST00000516675 260 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 RNU7-193P-201ENST00000516723 65 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 RNU1-40P-201ENST00000516816 164 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 RNU1-97P-201ENST00000516872 164 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 Y_RNA.715-201ENST00000517082 110 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 CYCSP26-201ENST00000534107 320 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 AC018630.3-201ENST00000542637 96 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.16□□□□□ -2.06
PCDH9Q9HC56 AC113195.1-201ENST00000579952 141 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 AC025754.2-201ENST00000606491 432 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 AL357075.2-201ENST00000614906 189 ntBASIC2.16□□□□□ -2.06
PCDH9Q9HC56 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PCDH9Q9HC56 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.16□□□□□ -2.06
PCDH9Q9HC56 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.16□□□□□ -2.06
PCDH9Q9HC56 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PCDH9Q9HC56 RNU1-62P-201ENST00000362599 164 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 RNU1-76P-201ENST00000362903 159 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 Y_RNA.145-201ENST00000363527 102 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 RNU6-1305P-201ENST00000364353 104 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 RNU6-438P-201ENST00000365561 103 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 RNU6-301P-201ENST00000384277 107 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 SNORD78.2-201ENST00000391076 69 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 RNU2-48P-201ENST00000410694 191 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PCDH9Q9HC56 AC009238.1-201ENST00000442165 424 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 AC009237.6-201ENST00000446969 424 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 UQCRBP2-201ENST00000447827 297 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.15□□□□□ -2.07
PCDH9Q9HC56 HMGN2P18-201ENST00000450680 270 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 PCNPP5-201ENST00000452246 481 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 U8.20-201ENST00000459445 131 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 AC093852.1-201ENST00000503587 266 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 RNU6-991P-201ENST00000516168 107 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 RNU6-667P-201ENST00000517186 102 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 AC240442.1-201ENST00000616055 283 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 AL078596.1-201ENST00000624856 447 ntBASIC2.15□□□□□ -2.07
PCDH9Q9HC56 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.15□□□□□ -2.07
PCDH9Q9HC56 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.15□□□□□ -2.07
PCDH9Q9HC56 Y_RNA.210-201ENST00000364161 110 ntBASIC2.14□□□□□ -2.07
PCDH9Q9HC56 RNA5SP126-201ENST00000365092 109 ntBASIC2.14□□□□□ -2.07
PCDH9Q9HC56 RNA5SP138-201ENST00000365098 114 ntBASIC2.14□□□□□ -2.07
PCDH9Q9HC56 SNORA25B-201ENST00000365507 128 ntBASIC2.14□□□□□ -2.07
PCDH9Q9HC56 Y_RNA.458-201ENST00000384240 102 ntBASIC2.14□□□□□ -2.07
PCDH9Q9HC56 MIR1252-201ENST00000408861 65 ntBASIC2.14□□□□□ -2.07
PCDH9Q9HC56 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.14□□□□□ -2.07
PCDH9Q9HC56 AC018868.1-201ENST00000491307 315 ntBASIC2.14□□□□□ -2.07
PCDH9Q9HC56 SNORA40.9-201ENST00000515895 93 ntBASIC2.14□□□□□ -2.07
PCDH9Q9HC56 RNU6-408P-201ENST00000515910 100 ntBASIC2.14□□□□□ -2.07
PCDH9Q9HC56 SNORA4.4-201ENST00000515921 135 ntBASIC2.14□□□□□ -2.07
PCDH9Q9HC56 RNU6-1046P-201ENST00000516538 107 ntBASIC2.14□□□□□ -2.07
PCDH9Q9HC56 RNU6-1012P-201ENST00000516606 109 ntBASIC2.14□□□□□ -2.07
PCDH9Q9HC56 RNA5SP490-201ENST00000517141 136 ntBASIC2.14□□□□□ -2.07
PCDH9Q9HC56 AC131281.1-201ENST00000522984 164 ntBASIC2.14□□□□□ -2.07
PCDH9Q9HC56 SNORD11B-201ENST00000607707 90 ntBASIC2.14□□□□□ -2.07
PCDH9Q9HC56 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PCDH9Q9HC56 Y_RNA.153-201ENST00000363615 91 ntBASIC2.13□□□□□ -2.07
PCDH9Q9HC56 SNORA16B-201ENST00000364674 135 ntBASIC2.13□□□□□ -2.07
PCDH9Q9HC56 Y_RNA.498-201ENST00000384460 102 ntBASIC2.13□□□□□ -2.07
PCDH9Q9HC56 Y_RNA.551-201ENST00000384661 102 ntBASIC2.13□□□□□ -2.07
PCDH9Q9HC56 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.13□□□□□ -2.07
PCDH9Q9HC56 RNU2-20P-201ENST00000410425 191 ntBASIC2.13□□□□□ -2.07
PCDH9Q9HC56 FCF1P4-201ENST00000448326 183 ntBASIC2.13□□□□□ -2.07
PCDH9Q9HC56 AC007395.1-201ENST00000451333 677 ntBASIC2.13□□□□□ -2.07
PCDH9Q9HC56 RNU6-344P-201ENST00000516635 111 ntBASIC2.13□□□□□ -2.07
PCDH9Q9HC56 MIR4298-201ENST00000584380 73 ntBASIC2.13□□□□□ -2.07
PCDH9Q9HC56 AC002984.1-201ENST00000591692 448 ntBASIC2.13□□□□□ -2.07
PCDH9Q9HC56 AC136443.5-201ENST00000603741 370 ntBASIC2.13□□□□□ -2.07
PCDH9Q9HC56 RPL17P51-201ENST00000605218 238 ntBASIC2.13□□□□□ -2.07
PCDH9Q9HC56 AL021879.1-201ENST00000611756 288 ntBASIC2.13□□□□□ -2.07
PCDH9Q9HC56 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.13□□□□□ -2.07
PCDH9Q9HC56 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
PCDH9Q9HC56 RNU6-238P-201ENST00000363313 106 ntBASIC2.12□□□□□ -2.07
PCDH9Q9HC56 Y_RNA.143-201ENST00000363520 106 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms