Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC109329.2-201ENST00000519658 482 ntBASIC4.37□□□□□ -1.71
LRCH3Q96II8 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LRCH3Q96II8 AL160290.3-201ENST00000604869 165 ntBASIC4.37□□□□□ -1.71
LRCH3Q96II8 MIR8057-201ENST00000620957 69 ntBASIC4.37□□□□□ -1.71
LRCH3Q96II8 AC091905.2-201ENST00000623143 306 ntBASIC4.37□□□□□ -1.71
LRCH3Q96II8 MIR4662A-201ENST00000637499 67 ntBASIC4.37□□□□□ -1.71
LRCH3Q96II8 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.37□□□□□ -1.71
LRCH3Q96II8 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRCH3Q96II8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRCH3Q96II8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.37□□□□□ -1.71
LRCH3Q96II8 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LRCH3Q96II8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.36□□□□□ -1.71
LRCH3Q96II8 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRCH3Q96II8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LRCH3Q96II8 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.36□□□□□ -1.71
LRCH3Q96II8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRCH3Q96II8 Y_RNA.10-201ENST00000362371 110 ntBASIC4.36□□□□□ -1.71
LRCH3Q96II8 RNU6-776P-201ENST00000364403 104 ntBASIC4.36□□□□□ -1.71
LRCH3Q96II8 RNU6-1022P-201ENST00000365049 104 ntBASIC4.36□□□□□ -1.71
LRCH3Q96II8 RNU6-1240P-201ENST00000365155 104 ntBASIC4.36□□□□□ -1.71
LRCH3Q96II8 RNU1-63P-201ENST00000383902 164 ntBASIC4.36□□□□□ -1.71
LRCH3Q96II8 RNA5SP129-201ENST00000410276 118 ntBASIC4.36□□□□□ -1.71
LRCH3Q96II8 AC096949.1-201ENST00000412047 152 ntBASIC4.36□□□□□ -1.71
LRCH3Q96II8 AC006011.1-201ENST00000442758 349 ntBASIC4.36□□□□□ -1.71
LRCH3Q96II8 Vault.1-201ENST00000516474 102 ntBASIC4.36□□□□□ -1.71
LRCH3Q96II8 RNU6-267P-201ENST00000516714 103 ntBASIC4.36□□□□□ -1.71
LRCH3Q96II8 RNU6-1096P-201ENST00000517089 102 ntBASIC4.36□□□□□ -1.71
LRCH3Q96II8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.36□□□□□ -1.71
LRCH3Q96II8 AC008507.4-201ENST00000585464 127 ntBASIC4.36□□□□□ -1.71
LRCH3Q96II8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRCH3Q96II8 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRCH3Q96II8 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRCH3Q96II8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.36□□□□□ -1.71
LRCH3Q96II8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRCH3Q96II8 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
LRCH3Q96II8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRCH3Q96II8 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.35□□□□□ -1.71
LRCH3Q96II8 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRCH3Q96II8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRCH3Q96II8 RNU6-170P-201ENST00000362832 104 ntBASIC4.35□□□□□ -1.71
LRCH3Q96II8 SNORD115-13-201ENST00000363358 82 ntBASIC4.35□□□□□ -1.71
LRCH3Q96II8 SNORD115-16-201ENST00000363887 82 ntBASIC4.35□□□□□ -1.71
LRCH3Q96II8 SNORD115-1-201ENST00000364961 82 ntBASIC4.35□□□□□ -1.71
LRCH3Q96II8 SNORA2.2-201ENST00000365473 135 ntBASIC4.35□□□□□ -1.71
LRCH3Q96II8 Y_RNA.621-201ENST00000411065 96 ntBASIC4.35□□□□□ -1.71
LRCH3Q96II8 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.35□□□□□ -1.71
LRCH3Q96II8 AC009238.1-201ENST00000442165 424 ntBASIC4.35□□□□□ -1.71
LRCH3Q96II8 AC009237.6-201ENST00000446969 424 ntBASIC4.35□□□□□ -1.71
LRCH3Q96II8 RNA5SP360-201ENST00000516555 118 ntBASIC4.35□□□□□ -1.71
LRCH3Q96II8 AC004486.1-201ENST00000546846 233 ntBASIC4.35□□□□□ -1.71
LRCH3Q96II8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.35□□□□□ -1.71
LRCH3Q96II8 AC008739.2-201ENST00000597006 317 ntBASIC4.35□□□□□ -1.71
LRCH3Q96II8 AC244505.7-201ENST00000599675 272 ntBASIC4.35□□□□□ -1.71
LRCH3Q96II8 AC013412.1-201ENST00000610687 192 ntBASIC4.35□□□□□ -1.71
LRCH3Q96II8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRCH3Q96II8 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRCH3Q96II8 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRCH3Q96II8 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
LRCH3Q96II8 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRCH3Q96II8 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.35□□□□□ -1.71
LRCH3Q96II8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
LRCH3Q96II8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.35□□□□□ -1.71
LRCH3Q96II8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
LRCH3Q96II8 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRCH3Q96II8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
LRCH3Q96II8 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRCH3Q96II8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LRCH3Q96II8 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
LRCH3Q96II8 RNU1-133P-201ENST00000364867 167 ntBASIC4.34□□□□□ -1.71
LRCH3Q96II8 RNU6-418P-201ENST00000384035 107 ntBASIC4.34□□□□□ -1.71
LRCH3Q96II8 RNU1-44P-201ENST00000384453 163 ntBASIC4.34□□□□□ -1.71
LRCH3Q96II8 Y_RNA.531-201ENST00000384589 121 ntBASIC4.34□□□□□ -1.71
LRCH3Q96II8 RNU6-750P-201ENST00000390946 107 ntBASIC4.34□□□□□ -1.71
LRCH3Q96II8 SNORA3.3-201ENST00000408712 125 ntBASIC4.34□□□□□ -1.71
LRCH3Q96II8 RNU6-938P-201ENST00000411285 103 ntBASIC4.34□□□□□ -1.71
LRCH3Q96II8 RPS29P21-201ENST00000496272 170 ntBASIC4.34□□□□□ -1.71
LRCH3Q96II8 RNU6-948P-201ENST00000516374 107 ntBASIC4.34□□□□□ -1.71
LRCH3Q96II8 RNU6-1018P-201ENST00000516577 106 ntBASIC4.34□□□□□ -1.71
LRCH3Q96II8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.34□□□□□ -1.71
LRCH3Q96II8 MIR3609-201ENST00000582661 80 ntBASIC4.34□□□□□ -1.71
LRCH3Q96II8 MIR548Z-201ENST00000584743 97 ntBASIC4.34□□□□□ -1.71
LRCH3Q96II8 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRCH3Q96II8 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
LRCH3Q96II8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LRCH3Q96II8 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.34□□□□□ -1.72
LRCH3Q96II8 AC027290.2-201ENST00000623210 18662 ntBASIC4.33□□□□□ -1.72
LRCH3Q96II8 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LRCH3Q96II8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
LRCH3Q96II8 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
LRCH3Q96II8 RNY1P6-201ENST00000384193 109 ntBASIC4.33□□□□□ -1.72
LRCH3Q96II8 RNU6-1235P-201ENST00000384559 107 ntBASIC4.33□□□□□ -1.72
LRCH3Q96II8 RNA5SP120-201ENST00000410900 112 ntBASIC4.33□□□□□ -1.72
LRCH3Q96II8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.33□□□□□ -1.72
LRCH3Q96II8 BTF3P4-201ENST00000418852 495 ntBASIC4.33□□□□□ -1.72
LRCH3Q96II8 AL139247.1-201ENST00000422768 325 ntBASIC4.33□□□□□ -1.72
LRCH3Q96II8 SNRPGP10-201ENST00000432323 225 ntBASIC4.33□□□□□ -1.72
LRCH3Q96II8 RNU6-498P-201ENST00000459468 107 ntBASIC4.33□□□□□ -1.72
LRCH3Q96II8 AC025518.1-201ENST00000479856 347 ntBASIC4.33□□□□□ -1.72
LRCH3Q96II8 HMGN1P7-201ENST00000491722 313 ntBASIC4.33□□□□□ -1.72
LRCH3Q96II8 AC113410.1-201ENST00000505029 247 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms