Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU6-1278P-201ENST00000516130 107 ntBASIC3.32□□□□□ -1.88
BRF1Q92994 SCARNA13-201ENST00000516672 275 ntBASIC3.32□□□□□ -1.88
BRF1Q92994 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.32□□□□□ -1.88
BRF1Q92994 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.32□□□□□ -1.88
BRF1Q92994 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.32□□□□□ -1.88
BRF1Q92994 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.32□□□□□ -1.88
BRF1Q92994 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
BRF1Q92994 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BRF1Q92994 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
BRF1Q92994 AL157777.2-201ENST00000258070 137 ntBASIC3.31□□□□□ -1.88
BRF1Q92994 RNY1P5-201ENST00000383890 115 ntBASIC3.31□□□□□ -1.88
BRF1Q92994 RNU6-187P-201ENST00000384139 106 ntBASIC3.31□□□□□ -1.88
BRF1Q92994 MIR548B-201ENST00000385247 97 ntBASIC3.31□□□□□ -1.88
BRF1Q92994 AL357139.1-201ENST00000407792 426 ntBASIC3.31□□□□□ -1.88
BRF1Q92994 SRIP1-201ENST00000489235 288 ntBASIC3.31□□□□□ -1.88
BRF1Q92994 HMGB3P3-201ENST00000510526 400 ntBASIC3.31□□□□□ -1.88
BRF1Q92994 AC091826.1-201ENST00000514065 313 ntBASIC3.31□□□□□ -1.88
BRF1Q92994 RNU6-1219P-201ENST00000516143 112 ntBASIC3.31□□□□□ -1.88
BRF1Q92994 SCARNA17.1-201ENST00000516211 143 ntBASIC3.31□□□□□ -1.88
BRF1Q92994 SCARNA17.2-201ENST00000516334 143 ntBASIC3.31□□□□□ -1.88
BRF1Q92994 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.31□□□□□ -1.88
BRF1Q92994 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.31□□□□□ -1.88
BRF1Q92994 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.31□□□□□ -1.88
BRF1Q92994 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.31□□□□□ -1.88
BRF1Q92994 MIR3910-1-201ENST00000580936 111 ntBASIC3.31□□□□□ -1.88
BRF1Q92994 AL133393.1-201ENST00000603277 287 ntBASIC3.31□□□□□ -1.88
BRF1Q92994 SCARNA17.4-201ENST00000614296 143 ntBASIC3.31□□□□□ -1.88
BRF1Q92994 AC021753.1-201ENST00000635724 168 ntBASIC3.31□□□□□ -1.88
BRF1Q92994 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
BRF1Q92994 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.31□□□□□ -1.88
BRF1Q92994 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.31□□□□□ -1.88
BRF1Q92994 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
BRF1Q92994 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BRF1Q92994 Y_RNA.170-201ENST00000363746 110 ntBASIC3.3□□□□□ -1.88
BRF1Q92994 RNU6-801P-201ENST00000364087 105 ntBASIC3.3□□□□□ -1.88
BRF1Q92994 Y_RNA.441-201ENST00000384123 112 ntBASIC3.3□□□□□ -1.88
BRF1Q92994 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.3□□□□□ -1.88
BRF1Q92994 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.3□□□□□ -1.88
BRF1Q92994 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.3□□□□□ -1.88
BRF1Q92994 MRPS36P2-201ENST00000512569 299 ntBASIC3.3□□□□□ -1.88
BRF1Q92994 SUMO2P18-201ENST00000518873 252 ntBASIC3.3□□□□□ -1.88
BRF1Q92994 MIR3684-201ENST00000579779 74 ntBASIC3.3□□□□□ -1.88
BRF1Q92994 AL161756.2-201ENST00000604597 246 ntBASIC3.3□□□□□ -1.88
BRF1Q92994 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.3□□□□□ -1.88
BRF1Q92994 U6.115-201ENST00000636045 103 ntBASIC3.3□□□□□ -1.88
BRF1Q92994 U2.22-201ENST00000636441 106 ntBASIC3.3□□□□□ -1.88
BRF1Q92994 AC010329.5-201ENST00000623497 2174 ntBASIC3.29□□□□□ -1.88
BRF1Q92994 FAM35CP-201ENST00000554755 2470 ntBASIC3.29□□□□□ -1.88
BRF1Q92994 MIR128-1-201ENST00000384921 82 ntBASIC3.29□□□□□ -1.88
BRF1Q92994 RNU6-763P-201ENST00000390865 106 ntBASIC3.29□□□□□ -1.88
BRF1Q92994 AC091021.1-201ENST00000468051 388 ntBASIC3.29□□□□□ -1.88
BRF1Q92994 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.29□□□□□ -1.88
BRF1Q92994 RNA5SP385-201ENST00000515947 110 ntBASIC3.29□□□□□ -1.88
BRF1Q92994 RNA5SP76-201ENST00000516277 87 ntBASIC3.29□□□□□ -1.88
BRF1Q92994 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.29□□□□□ -1.88
BRF1Q92994 AC108706.1-201ENST00000611053 297 ntBASIC3.29□□□□□ -1.88
BRF1Q92994 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.29□□□□□ -1.88
BRF1Q92994 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.29□□□□□ -1.88
BRF1Q92994 AL161431.1-201ENST00000618966 4205 ntBASIC3.29□□□□□ -1.88
BRF1Q92994 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRF1Q92994 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
BRF1Q92994 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
BRF1Q92994 AC110774.1-201ENST00000623567 2018 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 SNORD114-7-201ENST00000362520 77 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 RNU6-1305P-201ENST00000364353 104 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 Y_RNA.368-201ENST00000365547 113 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 RNU6-1027P-201ENST00000383998 107 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 Y_RNA.571-201ENST00000384753 98 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 MIR491-201ENST00000384877 84 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 SNORA48.2-201ENST00000390926 124 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 AL135790.2-201ENST00000437701 267 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 HMGN2P9-201ENST00000476875 229 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.28□□□□□ -1.88
BRF1Q92994 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
BRF1Q92994 RNU6-1098P-201ENST00000516772 96 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 MIR3144-201ENST00000579460 79 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 MIR3200-201ENST00000580767 85 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 ZNF861P-201ENST00000588126 639 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 AC002064.3-201ENST00000623448 346 ntBASIC3.28□□□□□ -1.88
BRF1Q92994 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.28□□□□□ -1.88
BRF1Q92994 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
BRF1Q92994 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BRF1Q92994 Y_RNA.7-201ENST00000362352 102 ntBASIC3.27□□□□□ -1.89
BRF1Q92994 Y_RNA.121-201ENST00000363309 113 ntBASIC3.27□□□□□ -1.89
BRF1Q92994 SNORA9-201ENST00000384215 133 ntBASIC3.27□□□□□ -1.89
BRF1Q92994 RNU1-101P-201ENST00000391171 127 ntBASIC3.27□□□□□ -1.89
BRF1Q92994 MIR300-201ENST00000401138 83 ntBASIC3.27□□□□□ -1.89
BRF1Q92994 MIR1185-2-201ENST00000408687 86 ntBASIC3.27□□□□□ -1.89
BRF1Q92994 RNU6-1135P-201ENST00000411083 103 ntBASIC3.27□□□□□ -1.89
BRF1Q92994 AL139281.1-201ENST00000422120 335 ntBASIC3.27□□□□□ -1.89
BRF1Q92994 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.27□□□□□ -1.89
BRF1Q92994 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.27□□□□□ -1.89
BRF1Q92994 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.27□□□□□ -1.89
BRF1Q92994 AL135938.1-201ENST00000443141 297 ntBASIC3.27□□□□□ -1.89
BRF1Q92994 U8.19-201ENST00000459095 133 ntBASIC3.27□□□□□ -1.89
BRF1Q92994 RNU7-200P-201ENST00000516105 62 ntBASIC3.27□□□□□ -1.89
BRF1Q92994 SNORA74D-201ENST00000516404 141 ntBASIC3.27□□□□□ -1.89
BRF1Q92994 RNU5F-4P-201ENST00000516581 114 ntBASIC3.27□□□□□ -1.89
BRF1Q92994 AC093732.2-201ENST00000607950 274 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms