Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC078899.2-201ENST00000595282 212 ntBASIC2.34□□□□□ -2.03
USP38Q8NB14 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.34□□□□□ -2.03
USP38Q8NB14 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.34□□□□□ -2.03
USP38Q8NB14 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.34□□□□□ -2.03
USP38Q8NB14 RNU6-661P-201ENST00000362409 107 ntBASIC2.33□□□□□ -2.04
USP38Q8NB14 Y_RNA.99-201ENST00000363138 105 ntBASIC2.33□□□□□ -2.04
USP38Q8NB14 RNA5SP325-201ENST00000363756 130 ntBASIC2.33□□□□□ -2.04
USP38Q8NB14 RNU5F-3P-201ENST00000363767 117 ntBASIC2.33□□□□□ -2.04
USP38Q8NB14 Y_RNA.509-201ENST00000384506 99 ntBASIC2.33□□□□□ -2.04
USP38Q8NB14 MIR559-201ENST00000385188 96 ntBASIC2.33□□□□□ -2.04
USP38Q8NB14 SNORA69.1-201ENST00000390904 137 ntBASIC2.33□□□□□ -2.04
USP38Q8NB14 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
USP38Q8NB14 MIR1283-1-201ENST00000408494 87 ntBASIC2.33□□□□□ -2.04
USP38Q8NB14 AC123900.1-201ENST00000420390 96 ntBASIC2.33□□□□□ -2.04
USP38Q8NB14 BX510359.4-201ENST00000423750 193 ntBASIC2.33□□□□□ -2.04
USP38Q8NB14 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.33□□□□□ -2.04
USP38Q8NB14 U8.22-201ENST00000459141 133 ntBASIC2.33□□□□□ -2.04
USP38Q8NB14 SNORD11B-201ENST00000607707 90 ntBASIC2.33□□□□□ -2.04
USP38Q8NB14 AC010999.1-201ENST00000611856 324 ntBASIC2.33□□□□□ -2.04
USP38Q8NB14 AP000553.5-201ENST00000641933 54 ntBASIC2.33□□□□□ -2.04
USP38Q8NB14 AC073544.1-201ENST00000600110 1595 ntBASIC2.32□□□□□ -2.04
USP38Q8NB14 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
USP38Q8NB14 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
USP38Q8NB14 Y_RNA.332-201ENST00000365271 113 ntBASIC2.32□□□□□ -2.04
USP38Q8NB14 RNA5SP37-201ENST00000365420 130 ntBASIC2.32□□□□□ -2.04
USP38Q8NB14 RNU6-418P-201ENST00000384035 107 ntBASIC2.32□□□□□ -2.04
USP38Q8NB14 HMGN2P39-201ENST00000398005 273 ntBASIC2.32□□□□□ -2.04
USP38Q8NB14 MIR300-201ENST00000401138 83 ntBASIC2.32□□□□□ -2.04
USP38Q8NB14 AF228730.4-201ENST00000421457 183 ntBASIC2.32□□□□□ -2.04
USP38Q8NB14 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.32□□□□□ -2.04
USP38Q8NB14 AC096644.2-201ENST00000429278 159 ntBASIC2.32□□□□□ -2.04
USP38Q8NB14 AL163540.1-201ENST00000485382 386 ntBASIC2.32□□□□□ -2.04
USP38Q8NB14 AC090255.1-201ENST00000495779 349 ntBASIC2.32□□□□□ -2.04
USP38Q8NB14 RNU6-1170P-201ENST00000515974 106 ntBASIC2.32□□□□□ -2.04
USP38Q8NB14 RNU7-4P-201ENST00000516961 62 ntBASIC2.32□□□□□ -2.04
USP38Q8NB14 AC144568.1-201ENST00000520139 137 ntBASIC2.32□□□□□ -2.04
USP38Q8NB14 RNU6-23P-201ENST00000363283 107 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 Y_RNA.813-201ENST00000364639 102 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 SNORD87-201ENST00000364849 89 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 Y_RNA.428-201ENST00000384078 102 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 Y_RNA.431-201ENST00000384086 102 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 RNU6-793P-201ENST00000384233 104 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 Y_RNA.463-201ENST00000384271 102 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 RNU6-160P-201ENST00000384591 107 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 MIR17-201ENST00000385012 84 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 MIR29C-201ENST00000385231 88 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 RNU11-3P-201ENST00000391111 133 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 RNU1-139P-201ENST00000391307 165 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 RNU6-1001P-201ENST00000411265 100 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 AC099799.1-201ENST00000439809 192 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 UBE2V1P7-201ENST00000446395 340 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 AC016925.1-201ENST00000458303 298 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 RNU7-152P-201ENST00000458982 64 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 AC091179.3-201ENST00000474761 144 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.31□□□□□ -2.04
USP38Q8NB14 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.31□□□□□ -2.04
USP38Q8NB14 MZT1P2-201ENST00000604387 248 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 AL590240.4-201ENST00000616908 390 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 AC090574.1-201ENST00000623186 233 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.31□□□□□ -2.04
USP38Q8NB14 AL078596.1-201ENST00000624856 447 ntBASIC2.31□□□□□ -2.04
USP38Q8NB14 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
USP38Q8NB14 LINC02555-201ENST00000563933 1951 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USP38Q8NB14 MIR369-201ENST00000362155 70 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 RNU1-62P-201ENST00000362599 164 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 Y_RNA.315-201ENST00000365117 102 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 Y_RNA.415-201ENST00000384012 112 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 MIR518A2-201ENST00000384966 87 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 SNORA40.18-201ENST00000391200 128 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 RNU4-62P-201ENST00000410125 130 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 AP1B1P2-201ENST00000416196 106 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 AC016717.1-201ENST00000448918 286 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.3□□□□□ -2.04
USP38Q8NB14 AC007395.1-201ENST00000451333 677 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 RPL23AP63-201ENST00000498752 471 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 RNU6-344P-201ENST00000516635 111 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 RNU6-107P-201ENST00000516643 102 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 SNORD116.3-201ENST00000517176 78 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.3□□□□□ -2.04
USP38Q8NB14 AL050343.2-201ENST00000607338 280 ntBASIC2.3□□□□□ -2.04
USP38Q8NB14 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
USP38Q8NB14 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
USP38Q8NB14 AC006026.1-201ENST00000444025 1803 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 MTND5P35-201ENST00000557537 1720 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 SNORD114-6-201ENST00000364393 72 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 RNU6-1164P-201ENST00000364428 107 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 RNU6-281P-201ENST00000384212 103 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 SNORA51.11-201ENST00000384442 131 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 MIR597-201ENST00000384968 97 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 MIR628-201ENST00000385229 95 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 AC019129.1-201ENST00000403786 261 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 HMGN2P38-201ENST00000423806 265 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 EIF1P2-201ENST00000428233 350 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.29□□□□□ -2.04
USP38Q8NB14 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.29□□□□□ -2.04
USP38Q8NB14 AC074290.1-201ENST00000448883 135 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 RPL23AP7-203ENST00000449021 469 ntBASIC2.29□□□□□ -2.04
USP38Q8NB14 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms