Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 MIR6134-201ENST00000617606 109 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 SNORA50A-202ENST00000629536 136 ntBASIC3.09□□□□□ -1.91
TTC9BQ8N6N2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.09□□□□□ -1.92
TTC9BQ8N6N2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.09□□□□□ -1.92
TTC9BQ8N6N2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.09□□□□□ -1.92
TTC9BQ8N6N2 RNU6-235P-201ENST00000362644 107 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 RNU5F-3P-201ENST00000363767 117 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 RNU6-376P-201ENST00000384731 106 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 MIR15B-201ENST00000385045 98 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 RNU6-588P-201ENST00000410281 105 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 RPL23AP58-201ENST00000440453 469 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 AC006539.3-201ENST00000454258 129 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 RPL31P41-201ENST00000477967 372 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 RPL23AP70-201ENST00000483361 460 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 AC083906.5-201ENST00000503722 328 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 SNORA31.1-201ENST00000515993 133 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 SNORA31.5-201ENST00000516190 133 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 SNORA72.7-201ENST00000516349 94 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 CR383656.8-201ENST00000549046 145 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 NACAP3-201ENST00000552100 481 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 MIR4679-2-201ENST00000578358 77 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 MIR4672-201ENST00000583126 81 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 Y_RNA.802-201ENST00000614892 130 ntBASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.08□□□□□ -1.92
TTC9BQ8N6N2 AP003122.5-201ENST00000527668 3766 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 RNU6-643P-201ENST00000384018 107 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 SNORA72.4-201ENST00000384174 132 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 Y_RNA.521-201ENST00000384560 114 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 AL031003.1-201ENST00000404229 172 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 AL031121.1-201ENST00000406553 254 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 RNU6-855P-201ENST00000410395 104 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 RPS26P42-201ENST00000413485 326 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 AC092047.1-201ENST00000424997 240 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 AC078809.1-201ENST00000427601 140 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 RNA5SP367-201ENST00000516557 118 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 Y_RNA.709-201ENST00000516952 92 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 RNU1-117P-201ENST00000517041 158 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 AC136628.3-201ENST00000521868 290 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 AC006023.1-201ENST00000603944 259 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 MIR6844-201ENST00000637122 62 ntBASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.07□□□□□ -1.92
TTC9BQ8N6N2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 RNU6-915P-201ENST00000364943 103 ntBASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 RNU6-217P-201ENST00000384164 104 ntBASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 RNU6-1197P-201ENST00000391183 107 ntBASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 RNA5SP38-201ENST00000410750 119 ntBASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 AC245291.1-201ENST00000419501 328 ntBASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 AC105272.1-201ENST00000438604 198 ntBASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 AL357134.1-201ENST00000445848 426 ntBASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 AL031274.2-201ENST00000599419 203 ntBASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 AL670379.2-201ENST00000604983 252 ntBASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 AL078604.3-201ENST00000615580 211 ntBASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 SNORD98-201ENST00000636377 67 ntBASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
TTC9BQ8N6N2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 RNU6-147P-201ENST00000383983 107 ntBASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 RNU6-1144P-201ENST00000384247 104 ntBASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 Y_RNA.500-201ENST00000384466 111 ntBASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 MIR616-201ENST00000385293 97 ntBASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 AL512604.1-201ENST00000404812 257 ntBASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 AC108938.1-201ENST00000451204 136 ntBASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 RNU5E-3P-201ENST00000515913 68 ntBASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 AC009163.5-201ENST00000575421 637 ntBASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 AC024614.2-201ENST00000577584 372 ntBASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 AC006254.2-201ENST00000603259 279 ntBASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.05□□□□□ -1.92
TTC9BQ8N6N2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms