Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.11□□□□□ -1.91
CARFQ8N187 MIR5006-201ENST00000583027 110 ntBASIC3.11□□□□□ -1.91
CARFQ8N187 MIR4325-201ENST00000583049 90 ntBASIC3.11□□□□□ -1.91
CARFQ8N187 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.11□□□□□ -1.91
CARFQ8N187 HSPE1P7-201ENST00000604681 321 ntBASIC3.11□□□□□ -1.91
CARFQ8N187 AC073476.4-201ENST00000628409 72 ntBASIC3.11□□□□□ -1.91
CARFQ8N187 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CARFQ8N187 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CARFQ8N187 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.11□□□□□ -1.91
CARFQ8N187 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.1□□□□□ -1.91
CARFQ8N187 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CARFQ8N187 AP003122.5-201ENST00000527668 3766 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 RNA5SP139-201ENST00000364340 117 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 Y_RNA.310-201ENST00000365063 113 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 Y_RNA.341-201ENST00000365341 102 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.1□□□□□ -1.91
CARFQ8N187 RNU6-80P-201ENST00000384195 107 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 RNU6-19P-201ENST00000384718 107 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 MT-TT-201ENST00000387460 66 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 MIR526A2-201ENST00000390198 65 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 AC104332.2-201ENST00000429959 156 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 TOMM22P2-201ENST00000430735 237 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.1□□□□□ -1.91
CARFQ8N187 RPL23AP58-201ENST00000440453 469 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.1□□□□□ -1.91
CARFQ8N187 AL121914.1-201ENST00000450188 156 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 RNU7-141P-201ENST00000459304 62 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 snoU13.14-201ENST00000459372 104 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 RN7SL863P-201ENST00000462370 296 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.1□□□□□ -1.91
CARFQ8N187 RNA5SP385-201ENST00000515947 110 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 AC027176.1-201ENST00000560204 514 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.1□□□□□ -1.91
CARFQ8N187 MIR4425-201ENST00000580572 84 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 MIR3609-201ENST00000582661 80 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 U6.115-201ENST00000636045 103 ntBASIC3.1□□□□□ -1.91
CARFQ8N187 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CARFQ8N187 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CARFQ8N187 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CARFQ8N187 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CARFQ8N187 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CARFQ8N187 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.1□□□□□ -1.91
CARFQ8N187 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CARFQ8N187 RNU1-70P-201ENST00000362618 164 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 RNU6-1010P-201ENST00000362757 107 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 U3.9-201ENST00000363823 204 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 RNU6-407P-201ENST00000365280 104 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 Y_RNA.361-201ENST00000365515 120 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 Y_RNA.456-201ENST00000384232 111 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 RNU6-748P-201ENST00000384648 107 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 SNORD37.2-201ENST00000391075 66 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CARFQ8N187 CST9LP2-201ENST00000437612 320 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 RN7SL504P-201ENST00000494496 287 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 AC145146.1-201ENST00000496370 254 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 RNU6-561P-201ENST00000516222 102 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 LARP7P3-201ENST00000579888 337 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 MIR2682-201ENST00000580305 110 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 MIR3200-201ENST00000580767 85 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 AL391903.3-201ENST00000612158 163 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 TUG1_4.1-201ENST00000619464 181 ntBASIC3.09□□□□□ -1.91
CARFQ8N187 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CARFQ8N187 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.09□□□□□ -1.92
CARFQ8N187 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.08□□□□□ -1.92
CARFQ8N187 AL391516.1-201ENST00000554380 2449 ntBASIC3.08□□□□□ -1.92
CARFQ8N187 RNU6-1205P-201ENST00000363625 106 ntBASIC3.08□□□□□ -1.92
CARFQ8N187 RNU6-643P-201ENST00000384018 107 ntBASIC3.08□□□□□ -1.92
CARFQ8N187 SNORA67.2-201ENST00000384300 149 ntBASIC3.08□□□□□ -1.92
CARFQ8N187 MIR15B-201ENST00000385045 98 ntBASIC3.08□□□□□ -1.92
CARFQ8N187 SNORA48.5-201ENST00000391143 135 ntBASIC3.08□□□□□ -1.92
CARFQ8N187 RNU6-460P-201ENST00000391158 108 ntBASIC3.08□□□□□ -1.92
CARFQ8N187 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.08□□□□□ -1.92
CARFQ8N187 AC009969.1-201ENST00000438726 172 ntBASIC3.08□□□□□ -1.92
CARFQ8N187 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.08□□□□□ -1.92
CARFQ8N187 AC006539.3-201ENST00000454258 129 ntBASIC3.08□□□□□ -1.92
CARFQ8N187 AC092991.1-201ENST00000477176 376 ntBASIC3.08□□□□□ -1.92
CARFQ8N187 RNU4-57P-201ENST00000515980 135 ntBASIC3.08□□□□□ -1.92
CARFQ8N187 RNU2-44P-201ENST00000516795 194 ntBASIC3.08□□□□□ -1.92
CARFQ8N187 SNORD19.2-201ENST00000516978 73 ntBASIC3.08□□□□□ -1.92
CARFQ8N187 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.08□□□□□ -1.92
CARFQ8N187 RNU6-91P-201ENST00000607774 107 ntBASIC3.08□□□□□ -1.92
CARFQ8N187 ZNF702P-202ENST00000434269 1966 ntBASIC3.08□□□□□ -1.92
CARFQ8N187 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CARFQ8N187 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.08□□□□□ -1.92
CARFQ8N187 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CARFQ8N187 RNU6-525P-201ENST00000363685 104 ntBASIC3.07□□□□□ -1.92
CARFQ8N187 Y_RNA.229-201ENST00000364347 113 ntBASIC3.07□□□□□ -1.92
CARFQ8N187 RNU2-49P-201ENST00000410666 184 ntBASIC3.07□□□□□ -1.92
CARFQ8N187 RNU2-52P-201ENST00000410680 190 ntBASIC3.07□□□□□ -1.92
CARFQ8N187 RPS29P12-201ENST00000460178 152 ntBASIC3.07□□□□□ -1.92
CARFQ8N187 RPS29P2-201ENST00000479278 136 ntBASIC3.07□□□□□ -1.92
CARFQ8N187 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.07□□□□□ -1.92
CARFQ8N187 AC025281.1-201ENST00000567026 265 ntBASIC3.07□□□□□ -1.92
CARFQ8N187 MIR4506-201ENST00000584693 77 ntBASIC3.07□□□□□ -1.92
CARFQ8N187 AC011603.4-201ENST00000611325 277 ntBASIC3.07□□□□□ -1.92
CARFQ8N187 AC012640.5-201ENST00000623897 319 ntBASIC3.07□□□□□ -1.92
CARFQ8N187 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.07□□□□□ -1.92
CARFQ8N187 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CARFQ8N187 SNORD114-19-201ENST00000363072 75 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms