Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR3939-201ENST00000582614 106 ntBASIC3.85□□□□□ -1.79
CCDC116Q8IYX3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.85□□□□□ -1.79
CCDC116Q8IYX3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC116Q8IYX3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC116Q8IYX3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC116Q8IYX3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 RNY4P6-201ENST00000363667 96 ntBASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 RNU6-438P-201ENST00000365561 103 ntBASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 SNORD24-201ENST00000383884 75 ntBASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 SNORD77.3-201ENST00000391113 65 ntBASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 RNA5SP252-201ENST00000391131 119 ntBASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 Y_RNA.621-201ENST00000411065 96 ntBASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 RN7SL604P-201ENST00000492589 296 ntBASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 RNU6-240P-201ENST00000516098 97 ntBASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 SNORA31.21-201ENST00000517180 77 ntBASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 IGKV3-31-201ENST00000523109 329 ntBASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 AC025627.2-201ENST00000576220 160 ntBASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 MIR4765-201ENST00000585007 77 ntBASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 Y_RNA.818-201ENST00000618813 71 ntBASIC3.84□□□□□ -1.79
CCDC116Q8IYX3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC116Q8IYX3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC116Q8IYX3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC116Q8IYX3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC116Q8IYX3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC116Q8IYX3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 RN7SKP202-201ENST00000410439 330 ntBASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 SNORA19.1-201ENST00000410656 129 ntBASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 RNU2-34P-201ENST00000516534 121 ntBASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 MIR5009-201ENST00000578736 100 ntBASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 RN7SL600P-201ENST00000581811 299 ntBASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 MIR5684-201ENST00000585074 65 ntBASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 AC090115.4-201ENST00000609970 188 ntBASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC116Q8IYX3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC116Q8IYX3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CCDC116Q8IYX3 SNORD74.4-201ENST00000364129 80 ntBASIC3.82□□□□□ -1.8
CCDC116Q8IYX3 Z98941.1-201ENST00000407764 100 ntBASIC3.82□□□□□ -1.8
CCDC116Q8IYX3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC116Q8IYX3 AL133162.1-201ENST00000463228 453 ntBASIC3.82□□□□□ -1.8
CCDC116Q8IYX3 RNU6-693P-201ENST00000516134 107 ntBASIC3.82□□□□□ -1.8
CCDC116Q8IYX3 Y_RNA.666-201ENST00000516187 112 ntBASIC3.82□□□□□ -1.8
CCDC116Q8IYX3 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.82□□□□□ -1.8
CCDC116Q8IYX3 MIR7151-201ENST00000617477 60 ntBASIC3.82□□□□□ -1.8
CCDC116Q8IYX3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC116Q8IYX3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CCDC116Q8IYX3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC116Q8IYX3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC116Q8IYX3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC116Q8IYX3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 SNORA60-201ENST00000362396 134 ntBASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 RNU6-414P-201ENST00000363705 104 ntBASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 Y_RNA.213-201ENST00000364178 111 ntBASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 MIR548A2-201ENST00000384956 97 ntBASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 MIR520G-201ENST00000385064 90 ntBASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 SNORA3C-201ENST00000408792 125 ntBASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 RNU6-592P-201ENST00000411333 103 ntBASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 U3.44-201ENST00000458938 192 ntBASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 HMGN1P7-201ENST00000491722 313 ntBASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 RNA5SP112-201ENST00000515937 99 ntBASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 RNY4P20-201ENST00000516678 93 ntBASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 RNU6-158P-201ENST00000517104 100 ntBASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 AC068339.1-201ENST00000526965 141 ntBASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 MIR6830-201ENST00000636015 70 ntBASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 AC002546.1-201ENST00000588041 2504 ntBASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC116Q8IYX3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 MIR423-201ENST00000362201 94 ntBASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 RNU6-820P-201ENST00000384273 107 ntBASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 MIR450A2-201ENST00000385022 100 ntBASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 RNA5SP306-201ENST00000411087 107 ntBASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 SNRPGP10-201ENST00000432323 225 ntBASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 MTATP8P2-201ENST00000435212 202 ntBASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 RPS26P48-201ENST00000491713 339 ntBASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 RAC1P2-201ENST00000511164 579 ntBASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 AC068657.1-201ENST00000520807 306 ntBASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 MRPL49P2-201ENST00000521066 465 ntBASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms