Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 RNU6-1205P-201ENST00000363625 106 ntBASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 Y_RNA.310-201ENST00000365063 113 ntBASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 RNU6-407P-201ENST00000365280 104 ntBASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 RNU6-198P-201ENST00000384258 104 ntBASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 RNU6-1228P-201ENST00000391014 107 ntBASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 RNA5SP201-201ENST00000410316 124 ntBASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 RNU6-855P-201ENST00000410395 104 ntBASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 TOMM22P2-201ENST00000430735 237 ntBASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 AL353705.1-201ENST00000433468 480 ntBASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 RPL23AP62-201ENST00000463396 453 ntBASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 RPL23AP67-201ENST00000465341 474 ntBASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 RN7SKP179-201ENST00000516126 217 ntBASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 AP001328.1-201ENST00000528550 176 ntBASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TMEFF1Q8IYR6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 RNA5SP295-201ENST00000362655 121 ntBASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 Y_RNA.118-201ENST00000363300 101 ntBASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 RNU6-728P-201ENST00000365375 104 ntBASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 RNU6-144P-201ENST00000383951 107 ntBASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 MIR15B-201ENST00000385045 98 ntBASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 RNA5SP252-201ENST00000391131 119 ntBASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 AL138878.1-201ENST00000405131 347 ntBASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 RNU6-1064P-201ENST00000410626 104 ntBASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 AL603825.1-201ENST00000438481 80 ntBASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 AL161651.1-201ENST00000440882 223 ntBASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 AC004386.2-201ENST00000441858 148 ntBASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 RAC1P5-201ENST00000512182 576 ntBASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 EIF4A1P12-201ENST00000551910 141 ntBASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 AC006111.3-201ENST00000622137 383 ntBASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TMEFF1Q8IYR6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 RNU4-82P-201ENST00000362443 140 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 SNORA70B-201ENST00000384210 135 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 MT-TT-201ENST00000387460 66 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 RNY4P18-201ENST00000391107 89 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 RNU6-460P-201ENST00000391158 108 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 AC023141.4-201ENST00000412031 328 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 AL159169.1-201ENST00000421119 127 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 AL365496.1-201ENST00000426885 215 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 AC027124.2-201ENST00000428249 105 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 RNU7-141P-201ENST00000459304 62 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 RNU7-23P-201ENST00000459465 62 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 AC107626.1-201ENST00000471084 183 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 RNU2-56P-201ENST00000516826 190 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 CYCSP26-201ENST00000534107 320 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 AC091544.4-201ENST00000555268 342 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 MIR4724-201ENST00000579485 89 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 MIR2682-201ENST00000580305 110 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 MIR5006-201ENST00000583027 110 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 U7.2-201ENST00000607576 63 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 uc_338.1-201ENST00000612113 180 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 U6.115-201ENST00000636045 103 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 GABRG2-229ENST00000641017 3628 ntBASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TMEFF1Q8IYR6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 RNU1-75P-201ENST00000347264 129 ntBASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 MIR30E-201ENST00000362104 92 ntBASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 U3.9-201ENST00000363823 204 ntBASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 Y_RNA.226-201ENST00000364337 114 ntBASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 Y_RNA.229-201ENST00000364347 113 ntBASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 RNU6-1180P-201ENST00000364935 107 ntBASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 SNORD6-201ENST00000365444 73 ntBASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 Y_RNA.361-201ENST00000365515 120 ntBASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 RNU6-768P-201ENST00000384683 107 ntBASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 RNU6-482P-201ENST00000391068 107 ntBASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 AL606845.1-201ENST00000404881 255 ntBASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 RNU6-1077P-201ENST00000410506 102 ntBASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 RNA5SP504-201ENST00000410676 117 ntBASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 AC004866.1-201ENST00000411748 78 ntBASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.18□□□□□ -1.9
TMEFF1Q8IYR6 EEF1B2P7-201ENST00000451177 676 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 207.7 ms