Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNA5SP167-201ENST00000365461 116 ntBASIC3.22□□□□□ -1.89
ATG4DQ86TL0 SNORD14D-201ENST00000384390 87 ntBASIC3.22□□□□□ -1.89
ATG4DQ86TL0 SNORA1.3-201ENST00000384676 136 ntBASIC3.22□□□□□ -1.89
ATG4DQ86TL0 RNY1P7-201ENST00000384743 110 ntBASIC3.22□□□□□ -1.89
ATG4DQ86TL0 AL590004.2-201ENST00000404787 371 ntBASIC3.22□□□□□ -1.89
ATG4DQ86TL0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 AC080013.2-201ENST00000460866 323 ntBASIC3.22□□□□□ -1.89
ATG4DQ86TL0 RPS26P55-201ENST00000471178 356 ntBASIC3.22□□□□□ -1.89
ATG4DQ86TL0 SNORA40.13-201ENST00000516379 120 ntBASIC3.22□□□□□ -1.89
ATG4DQ86TL0 RNA5SP153-201ENST00000516498 76 ntBASIC3.22□□□□□ -1.89
ATG4DQ86TL0 SNORA70.18-201ENST00000516696 98 ntBASIC3.22□□□□□ -1.89
ATG4DQ86TL0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 AC026333.2-201ENST00000542164 106 ntBASIC3.22□□□□□ -1.89
ATG4DQ86TL0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 AC091152.3-201ENST00000604227 325 ntBASIC3.22□□□□□ -1.89
ATG4DQ86TL0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 SNORD46.1-201ENST00000364139 104 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 MIR586-201ENST00000385035 97 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 RNU6-440P-201ENST00000390882 105 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 MIR1302-5-201ENST00000408164 150 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 CRYBB2P1-203ENST00000415709 538 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 EDDM3CP-201ENST00000415977 425 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 RBMY2UP-201ENST00000453474 324 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 RPS3P1-201ENST00000456781 192 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 snoU13.14-201ENST00000459372 104 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 AC106707.2-201ENST00000484182 374 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 AC078817.1-201ENST00000492623 435 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.21□□□□□ -1.9
ATG4DQ86TL0 AC023141.12-201ENST00000512399 199 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 AL929325.1-201ENST00000603096 117 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 AC093732.2-201ENST00000607950 274 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 AC073308.1-201ENST00000623696 305 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.21□□□□□ -1.9
ATG4DQ86TL0 MFSD8-233ENST00000641482 4860 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ATG4DQ86TL0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ATG4DQ86TL0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ATG4DQ86TL0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.21□□□□□ -1.9
ATG4DQ86TL0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
ATG4DQ86TL0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
ATG4DQ86TL0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4DQ86TL0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4DQ86TL0 RNU6-1010P-201ENST00000362757 107 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 SNORA51.4-201ENST00000364993 124 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 MIR490-201ENST00000384865 128 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 MIR891A-201ENST00000401237 79 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 RNA5SP511-201ENST00000410487 115 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 AC023141.4-201ENST00000412031 328 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 DBIP2-201ENST00000419076 262 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.2□□□□□ -1.9
ATG4DQ86TL0 CALM2P4-201ENST00000430810 426 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.2□□□□□ -1.9
ATG4DQ86TL0 VDAC1P3-201ENST00000434069 851 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 SNORD105B-201ENST00000458770 79 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 HMGN2P9-201ENST00000476875 229 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 RPL36AP21-201ENST00000490372 323 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 SNORD77.4-201ENST00000516158 81 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 RN7SKP43-201ENST00000516173 320 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 RPL23AP91-201ENST00000569211 455 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 AC105245.1-201ENST00000581934 244 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 RNVU1-4-201ENST00000612985 164 ntBASIC3.2□□□□□ -1.9
ATG4DQ86TL0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4DQ86TL0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4DQ86TL0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4DQ86TL0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
ATG4DQ86TL0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4DQ86TL0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4DQ86TL0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATG4DQ86TL0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATG4DQ86TL0 AL159152.1-201ENST00000635019 2587 ntBASIC3.19□□□□□ -1.9
ATG4DQ86TL0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.19□□□□□ -1.9
ATG4DQ86TL0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATG4DQ86TL0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATG4DQ86TL0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.19□□□□□ -1.9
ATG4DQ86TL0 Y_RNA.333-201ENST00000365274 102 ntBASIC3.19□□□□□ -1.9
ATG4DQ86TL0 RNU6-1014P-201ENST00000383940 103 ntBASIC3.19□□□□□ -1.9
ATG4DQ86TL0 MIR181A2-201ENST00000384863 110 ntBASIC3.19□□□□□ -1.9
ATG4DQ86TL0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ATG4DQ86TL0 RNU6-592P-201ENST00000411333 103 ntBASIC3.19□□□□□ -1.9
ATG4DQ86TL0 AL353705.1-201ENST00000433468 480 ntBASIC3.19□□□□□ -1.9
ATG4DQ86TL0 AL357552.1-201ENST00000445254 415 ntBASIC3.19□□□□□ -1.9
ATG4DQ86TL0 SNORD65B-201ENST00000459126 73 ntBASIC3.19□□□□□ -1.9
ATG4DQ86TL0 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.19□□□□□ -1.9
ATG4DQ86TL0 AC110768.1-201ENST00000509222 400 ntBASIC3.19□□□□□ -1.9
ATG4DQ86TL0 RN7SKP18-201ENST00000516005 275 ntBASIC3.19□□□□□ -1.9
ATG4DQ86TL0 RNU6-970P-201ENST00000516312 107 ntBASIC3.19□□□□□ -1.9
ATG4DQ86TL0 RNU1-104P-201ENST00000517280 175 ntBASIC3.19□□□□□ -1.9
ATG4DQ86TL0 uc_338.4-201ENST00000616635 176 ntBASIC3.19□□□□□ -1.9
ATG4DQ86TL0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.19□□□□□ -1.9
ATG4DQ86TL0 U6.105-201ENST00000637379 88 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms