Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL137067.1-201ENST00000615933 120 ntBASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 AC006435.5-201ENST00000624486 112 ntBASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 AC244205.2-202ENST00000635781 342 ntBASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LYSMD3Q7Z3D4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 RNA5SP167-201ENST00000365461 116 ntBASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 RNY1P7-201ENST00000384743 110 ntBASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 RN7SKP177-201ENST00000410567 355 ntBASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 AC063976.3-201ENST00000426849 329 ntBASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 RN7SL807P-201ENST00000470923 297 ntBASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 RNU6-113P-201ENST00000516653 101 ntBASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 SCARNA14-201ENST00000516903 136 ntBASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 CR392039.5-201ENST00000623201 510 ntBASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 AL672296.1-201ENST00000427780 2158 ntBASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 AC058791.1-201ENST00000608412 3198 ntBASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LYSMD3Q7Z3D4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 AL589743.1-201ENST00000551932 2712 ntBASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 Y_RNA.366-201ENST00000365540 102 ntBASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 MIR23A-201ENST00000385245 73 ntBASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 SNORA3.3-201ENST00000408712 125 ntBASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 RPS3AP1-201ENST00000413190 320 ntBASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 AC018634.1-201ENST00000437554 401 ntBASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 AL133547.1-201ENST00000448546 220 ntBASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 RPS27P22-201ENST00000478056 241 ntBASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 RNA5SP208-201ENST00000516156 78 ntBASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 RNU6-109P-201ENST00000516364 107 ntBASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 RNU6-184P-201ENST00000516514 107 ntBASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 AC087499.8-201ENST00000578406 226 ntBASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 MIR4644-201ENST00000579929 84 ntBASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 AC107294.3-201ENST00000609211 526 ntBASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LYSMD3Q7Z3D4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 RPL30P4-201ENST00000429309 333 ntBASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 AC010099.1-201ENST00000455434 375 ntBASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 RNU7-23P-201ENST00000459465 62 ntBASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 AP002884.2-201ENST00000471647 395 ntBASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 AC021205.2-201ENST00000480069 347 ntBASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 RAC1P2-201ENST00000511164 579 ntBASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 RN7SKP12-201ENST00000516275 143 ntBASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 RNU6-504P-201ENST00000516568 104 ntBASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 MIR3117-201ENST00000584034 78 ntBASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LYSMD3Q7Z3D4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 RNU6-1292P-201ENST00000383856 107 ntBASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 RNU6-198P-201ENST00000384258 104 ntBASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 MIR449B-201ENST00000384995 97 ntBASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 MIR590-201ENST00000385008 97 ntBASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 SNORA71B-202ENST00000439232 272 ntBASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 AL500522.2-201ENST00000448562 343 ntBASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 AC093663.1-201ENST00000497190 394 ntBASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 AC096725.1-201ENST00000514266 313 ntBASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 AC011604.1-201ENST00000545978 196 ntBASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 AC008739.2-201ENST00000597006 317 ntBASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 MIR6076-201ENST00000617521 113 ntBASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LYSMD3Q7Z3D4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LYSMD3Q7Z3D4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LYSMD3Q7Z3D4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
LYSMD3Q7Z3D4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LYSMD3Q7Z3D4 Y_RNA.220-201ENST00000364244 109 ntBASIC3.8□□□□□ -1.8
LYSMD3Q7Z3D4 MIR29B2-201ENST00000385055 81 ntBASIC3.8□□□□□ -1.8
LYSMD3Q7Z3D4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.8□□□□□ -1.8
LYSMD3Q7Z3D4 RN7SKP156-201ENST00000410308 342 ntBASIC3.8□□□□□ -1.8
LYSMD3Q7Z3D4 RNU6-592P-201ENST00000411333 103 ntBASIC3.8□□□□□ -1.8
LYSMD3Q7Z3D4 RNU1-61P-201ENST00000516107 151 ntBASIC3.8□□□□□ -1.8
LYSMD3Q7Z3D4 RNU6-1149P-201ENST00000516810 97 ntBASIC3.8□□□□□ -1.8
LYSMD3Q7Z3D4 AP000867.2-201ENST00000532468 320 ntBASIC3.8□□□□□ -1.8
LYSMD3Q7Z3D4 AL137849.1-201ENST00000604767 169 ntBASIC3.8□□□□□ -1.8
LYSMD3Q7Z3D4 SNORA62.6-201ENST00000606322 83 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms