Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC090425.1-201ENST00000610007 140 ntBASIC3.16□□□□□ -1.9
SSRP1Q08945 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.16□□□□□ -1.9
SSRP1Q08945 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSRP1Q08945 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
SSRP1Q08945 SNORA20.1-201ENST00000364790 130 ntBASIC3.15□□□□□ -1.91
SSRP1Q08945 RNU6-1180P-201ENST00000364935 107 ntBASIC3.15□□□□□ -1.91
SSRP1Q08945 RNU6-1318P-201ENST00000365389 103 ntBASIC3.15□□□□□ -1.91
SSRP1Q08945 RNU6-438P-201ENST00000365561 103 ntBASIC3.15□□□□□ -1.91
SSRP1Q08945 Y_RNA.510-201ENST00000384511 114 ntBASIC3.15□□□□□ -1.91
SSRP1Q08945 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSRP1Q08945 HMGN2P18-201ENST00000450680 270 ntBASIC3.15□□□□□ -1.91
SSRP1Q08945 RNA5SP385-201ENST00000515947 110 ntBASIC3.15□□□□□ -1.91
SSRP1Q08945 Y_RNA.673-201ENST00000516306 88 ntBASIC3.15□□□□□ -1.91
SSRP1Q08945 RNA5SP490-201ENST00000517141 136 ntBASIC3.15□□□□□ -1.91
SSRP1Q08945 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.15□□□□□ -1.91
SSRP1Q08945 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SSRP1Q08945 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.15□□□□□ -1.91
SSRP1Q08945 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
SSRP1Q08945 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.14□□□□□ -1.91
SSRP1Q08945 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.14□□□□□ -1.91
SSRP1Q08945 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SSRP1Q08945 SNORA25.1-201ENST00000362326 128 ntBASIC3.14□□□□□ -1.91
SSRP1Q08945 Y_RNA.136-201ENST00000363444 102 ntBASIC3.14□□□□□ -1.91
SSRP1Q08945 MIR1185-2-201ENST00000408687 86 ntBASIC3.14□□□□□ -1.91
SSRP1Q08945 RNA5SP21-201ENST00000410917 96 ntBASIC3.14□□□□□ -1.91
SSRP1Q08945 AC108059.2-201ENST00000434626 151 ntBASIC3.14□□□□□ -1.91
SSRP1Q08945 AC107083.1-201ENST00000439643 279 ntBASIC3.14□□□□□ -1.91
SSRP1Q08945 RNU7-57P-201ENST00000459540 60 ntBASIC3.14□□□□□ -1.91
SSRP1Q08945 RNU6-388P-201ENST00000517012 105 ntBASIC3.14□□□□□ -1.91
SSRP1Q08945 RNU6-389P-201ENST00000517048 105 ntBASIC3.14□□□□□ -1.91
SSRP1Q08945 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.14□□□□□ -1.91
SSRP1Q08945 AC005357.1-201ENST00000588399 301 ntBASIC3.14□□□□□ -1.91
SSRP1Q08945 U2.14-201ENST00000615943 113 ntBASIC3.14□□□□□ -1.91
SSRP1Q08945 AC135776.4-201ENST00000624300 1904 ntBASIC3.14□□□□□ -1.91
SSRP1Q08945 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSRP1Q08945 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
SSRP1Q08945 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSRP1Q08945 Y_RNA.20-201ENST00000362479 113 ntBASIC3.13□□□□□ -1.91
SSRP1Q08945 SNORA80A-201ENST00000363922 136 ntBASIC3.13□□□□□ -1.91
SSRP1Q08945 RNU6-743P-201ENST00000364151 106 ntBASIC3.13□□□□□ -1.91
SSRP1Q08945 RNU6-514P-201ENST00000384208 107 ntBASIC3.13□□□□□ -1.91
SSRP1Q08945 RNU6-975P-201ENST00000384296 105 ntBASIC3.13□□□□□ -1.91
SSRP1Q08945 RNU2-48P-201ENST00000410694 191 ntBASIC3.13□□□□□ -1.91
SSRP1Q08945 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.13□□□□□ -1.91
SSRP1Q08945 UBBP3-201ENST00000445497 241 ntBASIC3.13□□□□□ -1.91
SSRP1Q08945 AC104389.3-201ENST00000445629 235 ntBASIC3.13□□□□□ -1.91
SSRP1Q08945 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.13□□□□□ -1.91
SSRP1Q08945 RN7SKP282-201ENST00000516824 299 ntBASIC3.13□□□□□ -1.91
SSRP1Q08945 RNU6-794P-201ENST00000517261 64 ntBASIC3.13□□□□□ -1.91
SSRP1Q08945 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.13□□□□□ -1.91
SSRP1Q08945 MIR4506-201ENST00000584693 77 ntBASIC3.13□□□□□ -1.91
SSRP1Q08945 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.13□□□□□ -1.91
SSRP1Q08945 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SSRP1Q08945 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.13□□□□□ -1.91
SSRP1Q08945 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SSRP1Q08945 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SSRP1Q08945 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SSRP1Q08945 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.12□□□□□ -1.91
SSRP1Q08945 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSRP1Q08945 RNU6-1266P-201ENST00000362794 105 ntBASIC3.12□□□□□ -1.91
SSRP1Q08945 Y_RNA.418-201ENST00000384029 102 ntBASIC3.12□□□□□ -1.91
SSRP1Q08945 AL139095.1-201ENST00000404326 391 ntBASIC3.12□□□□□ -1.91
SSRP1Q08945 AL031121.1-201ENST00000406553 254 ntBASIC3.12□□□□□ -1.91
SSRP1Q08945 AL603910.2-201ENST00000407268 136 ntBASIC3.12□□□□□ -1.91
SSRP1Q08945 AC105272.1-201ENST00000438604 198 ntBASIC3.12□□□□□ -1.91
SSRP1Q08945 MRPS10P1-201ENST00000448483 130 ntBASIC3.12□□□□□ -1.91
SSRP1Q08945 AC018868.1-201ENST00000491307 315 ntBASIC3.12□□□□□ -1.91
SSRP1Q08945 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.12□□□□□ -1.91
SSRP1Q08945 RN7SKP40-201ENST00000517211 242 ntBASIC3.12□□□□□ -1.91
SSRP1Q08945 SNORA31.26-201ENST00000517250 137 ntBASIC3.12□□□□□ -1.91
SSRP1Q08945 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.12□□□□□ -1.91
SSRP1Q08945 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.12□□□□□ -1.91
SSRP1Q08945 PRELID2P1-201ENST00000552837 301 ntBASIC3.12□□□□□ -1.91
SSRP1Q08945 AC010900.2-201ENST00000604508 210 ntBASIC3.12□□□□□ -1.91
SSRP1Q08945 U4atac.1-201ENST00000618345 95 ntBASIC3.12□□□□□ -1.91
SSRP1Q08945 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SSRP1Q08945 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.11□□□□□ -1.91
SSRP1Q08945 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSRP1Q08945 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SSRP1Q08945 Y_RNA.54-201ENST00000362766 105 ntBASIC3.11□□□□□ -1.91
SSRP1Q08945 SNORD27-201ENST00000363981 72 ntBASIC3.11□□□□□ -1.91
SSRP1Q08945 Y_RNA.552-201ENST00000384665 112 ntBASIC3.11□□□□□ -1.91
SSRP1Q08945 AL139281.1-201ENST00000422120 335 ntBASIC3.11□□□□□ -1.91
SSRP1Q08945 AL137159.1-201ENST00000452808 512 ntBASIC3.11□□□□□ -1.91
SSRP1Q08945 RN7SL297P-201ENST00000483161 293 ntBASIC3.11□□□□□ -1.91
SSRP1Q08945 RN7SKP132-201ENST00000516001 208 ntBASIC3.11□□□□□ -1.91
SSRP1Q08945 RNU6-56P-201ENST00000516986 93 ntBASIC3.11□□□□□ -1.91
SSRP1Q08945 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.11□□□□□ -1.91
SSRP1Q08945 MIR3684-201ENST00000579779 74 ntBASIC3.11□□□□□ -1.91
SSRP1Q08945 ELOCP29-201ENST00000588193 334 ntBASIC3.11□□□□□ -1.91
SSRP1Q08945 snoZ196.1-201ENST00000625269 89 ntBASIC3.11□□□□□ -1.91
SSRP1Q08945 AC009487.4-201ENST00000624969 3585 ntBASIC3.11□□□□□ -1.91
SSRP1Q08945 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SSRP1Q08945 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.1□□□□□ -1.91
SSRP1Q08945 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.1□□□□□ -1.91
SSRP1Q08945 Y_RNA.243-201ENST00000364481 109 ntBASIC3.1□□□□□ -1.91
SSRP1Q08945 MIR9-1-201ENST00000385198 89 ntBASIC3.1□□□□□ -1.91
SSRP1Q08945 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.1□□□□□ -1.91
SSRP1Q08945 U3.40-201ENST00000408706 208 ntBASIC3.1□□□□□ -1.91
SSRP1Q08945 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms