Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
PCDH1Q08174 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
PCDH1Q08174 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PCDH1Q08174 AC110774.1-201ENST00000623567 2018 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 RNU6-834P-201ENST00000362367 110 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 RNY1P11-201ENST00000363759 113 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 RNU4-41P-201ENST00000364426 143 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 RNA5SP51-201ENST00000364750 119 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 RNU6-1325P-201ENST00000364905 105 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 RNU6-597P-201ENST00000365620 102 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 Y_RNA.587-201ENST00000391210 103 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 AL512604.1-201ENST00000404812 257 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 CYCSP4-201ENST00000429682 331 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 MRPS36P2-201ENST00000512569 299 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 RNU6-948P-201ENST00000516374 107 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 RNU6-659P-201ENST00000516454 104 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 RNU6-63P-201ENST00000516690 95 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDH1Q08174 UCA1.1-201ENST00000620952 75 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 AC022149.2-201ENST00000621061 203 ntBASIC3.45□□□□□ -1.86
PCDH1Q08174 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
PCDH1Q08174 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDH1Q08174 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDH1Q08174 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDH1Q08174 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDH1Q08174 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.44□□□□□ -1.86
PCDH1Q08174 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PCDH1Q08174 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDH1Q08174 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDH1Q08174 AL049781.1-201ENST00000623195 3585 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 AC091564.4-201ENST00000533934 2194 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 RNU1-72P-201ENST00000362976 153 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 RNA5SP387-201ENST00000364226 106 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 AC010154.1-201ENST00000425857 269 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 AL353705.1-201ENST00000433468 480 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 AL133547.1-201ENST00000448546 220 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 AC016925.1-201ENST00000458303 298 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 AC010531.2-201ENST00000465012 153 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 AC021205.2-201ENST00000480069 347 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 AC093663.1-201ENST00000497190 394 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 RNU6-586P-201ENST00000517265 104 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 AC025647.1-201ENST00000517879 253 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 AC018630.3-201ENST00000542637 96 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 MIR378D2-201ENST00000580636 98 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 AC096577.2-201ENST00000611455 153 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 MIR8058-201ENST00000615737 89 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 AC006435.5-201ENST00000624486 112 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 AC110079.1-202ENST00000635213 138 ntBASIC3.44□□□□□ -1.86
PCDH1Q08174 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDH1Q08174 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDH1Q08174 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
PCDH1Q08174 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
PCDH1Q08174 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.44□□□□□ -1.86
PCDH1Q08174 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PCDH1Q08174 AC009487.4-201ENST00000624969 3585 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDH1Q08174 AC093010.3-201ENST00000570269 15214 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCDH1Q08174 SNORD9-201ENST00000362566 104 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 RNU4-13P-201ENST00000364019 141 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 RNU6-1082P-201ENST00000364574 107 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 RNU6-1235P-201ENST00000384559 107 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 MIR449B-201ENST00000384995 97 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 AC006539.3-201ENST00000454258 129 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 RNU6-498P-201ENST00000459468 107 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 SCARNA11.3-201ENST00000517276 130 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 AC090142.3-201ENST00000519012 385 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDH1Q08174 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDH1Q08174 AC015720.1-201ENST00000565251 277 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 AC023043.3-201ENST00000593113 385 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 AC120024.3-201ENST00000603167 156 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 AL021707.8-201ENST00000609428 183 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.43□□□□□ -1.86
PCDH1Q08174 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.43□□□□□ -1.86
PCDH1Q08174 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDH1Q08174 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDH1Q08174 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDH1Q08174 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDH1Q08174 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDH1Q08174 AL355596.1-201ENST00000565399 3996 ntBASIC3.42□□□□□ -1.86
PCDH1Q08174 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDH1Q08174 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDH1Q08174 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PCDH1Q08174 RNU6-915P-201ENST00000364943 103 ntBASIC3.42□□□□□ -1.86
PCDH1Q08174 RNU6-117P-201ENST00000365415 107 ntBASIC3.42□□□□□ -1.86
PCDH1Q08174 RNU6-418P-201ENST00000384035 107 ntBASIC3.42□□□□□ -1.86
PCDH1Q08174 Y_RNA.563-201ENST00000384707 108 ntBASIC3.42□□□□□ -1.86
PCDH1Q08174 MIR181A2-201ENST00000384863 110 ntBASIC3.42□□□□□ -1.86
PCDH1Q08174 SNORA11.1-201ENST00000408133 129 ntBASIC3.42□□□□□ -1.86
PCDH1Q08174 RNA5SP511-201ENST00000410487 115 ntBASIC3.42□□□□□ -1.86
PCDH1Q08174 DBIP2-201ENST00000419076 262 ntBASIC3.42□□□□□ -1.86
PCDH1Q08174 CYCSP49-201ENST00000420810 319 ntBASIC3.42□□□□□ -1.86
PCDH1Q08174 AC008134.1-201ENST00000420943 193 ntBASIC3.42□□□□□ -1.86
PCDH1Q08174 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.42□□□□□ -1.86
PCDH1Q08174 AC245047.4-201ENST00000433189 144 ntBASIC3.42□□□□□ -1.86
PCDH1Q08174 GOT2P5-201ENST00000433995 546 ntBASIC3.42□□□□□ -1.86
PCDH1Q08174 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDH1Q08174 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDH1Q08174 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms