Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MIR3670-1-201ENST00000584160 65 ntBASIC2.4□□□□□ -2.03
RAE1P78406 MIR3670-3-201ENST00000584855 65 ntBASIC2.4□□□□□ -2.03
RAE1P78406 MIR3670-4-201ENST00000612260 65 ntBASIC2.4□□□□□ -2.03
RAE1P78406 AC004467.1-201ENST00000615678 330 ntBASIC2.4□□□□□ -2.03
RAE1P78406 AP001282.2-201ENST00000616149 309 ntBASIC2.4□□□□□ -2.03
RAE1P78406 AL590240.4-201ENST00000616908 390 ntBASIC2.4□□□□□ -2.03
RAE1P78406 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.4□□□□□ -2.03
RAE1P78406 AC135776.4-201ENST00000624300 1904 ntBASIC2.4□□□□□ -2.03
RAE1P78406 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RAE1P78406 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
RAE1P78406 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.4□□□□□ -2.03
RAE1P78406 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RAE1P78406 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
RAE1P78406 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RAE1P78406 AC009487.4-201ENST00000624969 3585 ntBASIC2.39□□□□□ -2.03
RAE1P78406 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RAE1P78406 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
RAE1P78406 Y_RNA.101-201ENST00000363154 102 ntBASIC2.39□□□□□ -2.03
RAE1P78406 Y_RNA.331-201ENST00000365267 102 ntBASIC2.39□□□□□ -2.03
RAE1P78406 SNORA25B-201ENST00000365507 128 ntBASIC2.39□□□□□ -2.03
RAE1P78406 MIR548B-201ENST00000385247 97 ntBASIC2.39□□□□□ -2.03
RAE1P78406 RNU2-54P-201ENST00000410299 190 ntBASIC2.39□□□□□ -2.03
RAE1P78406 RPL23AP36-201ENST00000413895 458 ntBASIC2.39□□□□□ -2.03
RAE1P78406 HMGN2P18-201ENST00000450680 270 ntBASIC2.39□□□□□ -2.03
RAE1P78406 SNORD127-201ENST00000458892 86 ntBASIC2.39□□□□□ -2.03
RAE1P78406 RNU6-667P-201ENST00000517186 102 ntBASIC2.39□□□□□ -2.03
RAE1P78406 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.39□□□□□ -2.03
RAE1P78406 PRELID2P1-201ENST00000552837 301 ntBASIC2.39□□□□□ -2.03
RAE1P78406 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
RAE1P78406 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
RAE1P78406 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RAE1P78406 AC010615.1-201ENST00000594254 1764 ntBASIC2.38□□□□□ -2.03
RAE1P78406 AC062016.1-201ENST00000355719 319 ntBASIC2.38□□□□□ -2.03
RAE1P78406 MIR335-201ENST00000362173 94 ntBASIC2.38□□□□□ -2.03
RAE1P78406 RNA5SP456-201ENST00000364002 114 ntBASIC2.38□□□□□ -2.03
RAE1P78406 Y_RNA.286-201ENST00000364813 102 ntBASIC2.38□□□□□ -2.03
RAE1P78406 DEFA7P-201ENST00000382676 285 ntBASIC2.38□□□□□ -2.03
RAE1P78406 RNU6-975P-201ENST00000384296 105 ntBASIC2.38□□□□□ -2.03
RAE1P78406 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RAE1P78406 AL139095.1-201ENST00000404326 391 ntBASIC2.38□□□□□ -2.03
RAE1P78406 MIR1185-2-201ENST00000408687 86 ntBASIC2.38□□□□□ -2.03
RAE1P78406 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.38□□□□□ -2.03
RAE1P78406 COTL1P1-201ENST00000422309 375 ntBASIC2.38□□□□□ -2.03
RAE1P78406 AC139712.2-201ENST00000424302 339 ntBASIC2.38□□□□□ -2.03
RAE1P78406 AL137159.1-201ENST00000452808 512 ntBASIC2.38□□□□□ -2.03
RAE1P78406 HMGB3P17-201ENST00000504195 649 ntBASIC2.38□□□□□ -2.03
RAE1P78406 RNU2-12P-201ENST00000517216 168 ntBASIC2.38□□□□□ -2.03
RAE1P78406 MIR4319-201ENST00000577285 85 ntBASIC2.38□□□□□ -2.03
RAE1P78406 LARP7P3-201ENST00000579888 337 ntBASIC2.38□□□□□ -2.03
RAE1P78406 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.38□□□□□ -2.03
RAE1P78406 AC006006.1-201ENST00000603082 144 ntBASIC2.38□□□□□ -2.03
RAE1P78406 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RAE1P78406 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
RAE1P78406 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RAE1P78406 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RAE1P78406 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.37□□□□□ -2.03
RAE1P78406 RNU6-743P-201ENST00000364151 106 ntBASIC2.37□□□□□ -2.03
RAE1P78406 Y_RNA.332-201ENST00000365271 113 ntBASIC2.37□□□□□ -2.03
RAE1P78406 RNU6-438P-201ENST00000365561 103 ntBASIC2.37□□□□□ -2.03
RAE1P78406 Y_RNA.446-201ENST00000384178 104 ntBASIC2.37□□□□□ -2.03
RAE1P78406 Y_RNA.562-201ENST00000384695 113 ntBASIC2.37□□□□□ -2.03
RAE1P78406 MIR483-201ENST00000385070 76 ntBASIC2.37□□□□□ -2.03
RAE1P78406 RNU2-38P-201ENST00000410856 79 ntBASIC2.37□□□□□ -2.03
RAE1P78406 RPS12P2-201ENST00000439728 269 ntBASIC2.37□□□□□ -2.03
RAE1P78406 AC009238.1-201ENST00000442165 424 ntBASIC2.37□□□□□ -2.03
RAE1P78406 AC009237.6-201ENST00000446969 424 ntBASIC2.37□□□□□ -2.03
RAE1P78406 RNU6-1132P-201ENST00000459214 107 ntBASIC2.37□□□□□ -2.03
RAE1P78406 RNA5SP356-201ENST00000515972 94 ntBASIC2.37□□□□□ -2.03
RAE1P78406 RNA5SP320-201ENST00000516263 124 ntBASIC2.37□□□□□ -2.03
RAE1P78406 RNU6-1338P-201ENST00000516328 91 ntBASIC2.37□□□□□ -2.03
RAE1P78406 RNU2-34P-201ENST00000516534 121 ntBASIC2.37□□□□□ -2.03
RAE1P78406 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.37□□□□□ -2.03
RAE1P78406 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.37□□□□□ -2.03
RAE1P78406 IGHVIII-44-202ENST00000636235 289 ntBASIC2.37□□□□□ -2.03
RAE1P78406 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
RAE1P78406 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
RAE1P78406 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RAE1P78406 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.36□□□□□ -2.03
RAE1P78406 MIR6073-201ENST00000352083 89 ntBASIC2.36□□□□□ -2.03
RAE1P78406 RNU6-454P-201ENST00000364292 107 ntBASIC2.36□□□□□ -2.03
RAE1P78406 Y_RNA.237-201ENST00000364439 102 ntBASIC2.36□□□□□ -2.03
RAE1P78406 MIR518C-201ENST00000384822 101 ntBASIC2.36□□□□□ -2.03
RAE1P78406 MIR27B-201ENST00000385129 97 ntBASIC2.36□□□□□ -2.03
RAE1P78406 RNU6-1199P-201ENST00000411249 104 ntBASIC2.36□□□□□ -2.03
RAE1P78406 AC009963.1-201ENST00000417265 157 ntBASIC2.36□□□□□ -2.03
RAE1P78406 AC063976.3-201ENST00000426849 329 ntBASIC2.36□□□□□ -2.03
RAE1P78406 RNU7-57P-201ENST00000459540 60 ntBASIC2.36□□□□□ -2.03
RAE1P78406 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.36□□□□□ -2.03
RAE1P78406 AC093259.1-201ENST00000509755 300 ntBASIC2.36□□□□□ -2.03
RAE1P78406 AC107222.1-201ENST00000510899 637 ntBASIC2.36□□□□□ -2.03
RAE1P78406 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.36□□□□□ -2.03
RAE1P78406 RNU6-991P-201ENST00000516168 107 ntBASIC2.36□□□□□ -2.03
RAE1P78406 RNU6-155P-201ENST00000516347 100 ntBASIC2.36□□□□□ -2.03
RAE1P78406 RNU6-966P-201ENST00000516479 104 ntBASIC2.36□□□□□ -2.03
RAE1P78406 NDUFA5P6-201ENST00000542110 379 ntBASIC2.36□□□□□ -2.03
RAE1P78406 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.36□□□□□ -2.03
RAE1P78406 AC006380.1-201ENST00000603598 186 ntBASIC2.36□□□□□ -2.03
RAE1P78406 MIR7106-201ENST00000612419 65 ntBASIC2.36□□□□□ -2.03
RAE1P78406 SDR42E1P4-201ENST00000620894 481 ntBASIC2.36□□□□□ -2.03
RAE1P78406 AC006001.4-201ENST00000622243 395 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms