Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
USP46P62068 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
USP46P62068 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
USP46P62068 RNU6-743P-201ENST00000364151 106 ntBASIC4.15□□□□□ -1.75
USP46P62068 U8.6-201ENST00000364939 135 ntBASIC4.15□□□□□ -1.75
USP46P62068 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
USP46P62068 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.15□□□□□ -1.75
USP46P62068 NDUFA4P2-201ENST00000489989 244 ntBASIC4.15□□□□□ -1.75
USP46P62068 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.15□□□□□ -1.75
USP46P62068 RNU6-1149P-201ENST00000516810 97 ntBASIC4.15□□□□□ -1.75
USP46P62068 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.15□□□□□ -1.75
USP46P62068 AC074050.1-201ENST00000563247 211 ntBASIC4.15□□□□□ -1.75
USP46P62068 AL137067.1-201ENST00000615933 120 ntBASIC4.15□□□□□ -1.75
USP46P62068 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
USP46P62068 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP46P62068 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.14□□□□□ -1.75
USP46P62068 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
USP46P62068 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.14□□□□□ -1.75
USP46P62068 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP46P62068 RNU6-640P-201ENST00000363693 105 ntBASIC4.14□□□□□ -1.75
USP46P62068 RNU6-1131P-201ENST00000364955 107 ntBASIC4.14□□□□□ -1.75
USP46P62068 Y_RNA.366-201ENST00000365540 102 ntBASIC4.14□□□□□ -1.75
USP46P62068 SNORD61-201ENST00000384252 73 ntBASIC4.14□□□□□ -1.75
USP46P62068 MIR30B-201ENST00000384850 88 ntBASIC4.14□□□□□ -1.75
USP46P62068 SNORA12.1-201ENST00000390873 148 ntBASIC4.14□□□□□ -1.75
USP46P62068 RHEBP3-201ENST00000411920 351 ntBASIC4.14□□□□□ -1.75
USP46P62068 AC025750.2-201ENST00000442609 450 ntBASIC4.14□□□□□ -1.75
USP46P62068 AC233266.1-201ENST00000454518 96 ntBASIC4.14□□□□□ -1.75
USP46P62068 RN7SL323P-201ENST00000494712 295 ntBASIC4.14□□□□□ -1.75
USP46P62068 AC093663.1-201ENST00000497190 394 ntBASIC4.14□□□□□ -1.75
USP46P62068 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC4.14□□□□□ -1.75
USP46P62068 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.14□□□□□ -1.75
USP46P62068 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.14□□□□□ -1.75
USP46P62068 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.14□□□□□ -1.75
USP46P62068 AC242852.1-201ENST00000612151 96 ntBASIC4.14□□□□□ -1.75
USP46P62068 uc_338.32-201ENST00000615087 172 ntBASIC4.14□□□□□ -1.75
USP46P62068 AC244015.1-201ENST00000622301 99 ntBASIC4.14□□□□□ -1.75
USP46P62068 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
USP46P62068 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP46P62068 Y_RNA.328-201ENST00000365208 113 ntBASIC4.13□□□□□ -1.75
USP46P62068 RNU6-1292P-201ENST00000383856 107 ntBASIC4.13□□□□□ -1.75
USP46P62068 MIR520G-201ENST00000385064 90 ntBASIC4.13□□□□□ -1.75
USP46P62068 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
USP46P62068 SNORA48.7-201ENST00000391302 135 ntBASIC4.13□□□□□ -1.75
USP46P62068 AP000567.1-201ENST00000406413 156 ntBASIC4.13□□□□□ -1.75
USP46P62068 RNU6-1077P-201ENST00000410506 102 ntBASIC4.13□□□□□ -1.75
USP46P62068 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.13□□□□□ -1.75
USP46P62068 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.13□□□□□ -1.75
USP46P62068 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.13□□□□□ -1.75
USP46P62068 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.13□□□□□ -1.75
USP46P62068 AC073413.2-201ENST00000604332 360 ntBASIC4.13□□□□□ -1.75
USP46P62068 AP001318.4-201ENST00000616637 121 ntBASIC4.13□□□□□ -1.75
USP46P62068 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.13□□□□□ -1.75
USP46P62068 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
USP46P62068 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP46P62068 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP46P62068 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.13□□□□□ -1.75
USP46P62068 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP46P62068 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
USP46P62068 TNPO1P3-201ENST00000436471 2662 ntBASIC4.12□□□□□ -1.75
USP46P62068 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP46P62068 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP46P62068 RNA5SP124-201ENST00000362739 110 ntBASIC4.12□□□□□ -1.75
USP46P62068 RNU1-72P-201ENST00000362976 153 ntBASIC4.12□□□□□ -1.75
USP46P62068 SNORA63.5-201ENST00000363548 123 ntBASIC4.12□□□□□ -1.75
USP46P62068 MIR554-201ENST00000384874 96 ntBASIC4.12□□□□□ -1.75
USP46P62068 AL031121.1-201ENST00000406553 254 ntBASIC4.12□□□□□ -1.75
USP46P62068 RNU6-1186P-201ENST00000410429 97 ntBASIC4.12□□□□□ -1.75
USP46P62068 HMGN2P34-201ENST00000437647 269 ntBASIC4.12□□□□□ -1.75
USP46P62068 AC083863.1-201ENST00000438811 231 ntBASIC4.12□□□□□ -1.75
USP46P62068 AL500522.2-201ENST00000448562 343 ntBASIC4.12□□□□□ -1.75
USP46P62068 SNORA4.4-201ENST00000515921 135 ntBASIC4.12□□□□□ -1.75
USP46P62068 RNU6-113P-201ENST00000516653 101 ntBASIC4.12□□□□□ -1.75
USP46P62068 SNORA67.7-201ENST00000516664 135 ntBASIC4.12□□□□□ -1.75
USP46P62068 SCARNA14-201ENST00000516903 136 ntBASIC4.12□□□□□ -1.75
USP46P62068 RNA5SP143-201ENST00000516936 115 ntBASIC4.12□□□□□ -1.75
USP46P62068 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.12□□□□□ -1.75
USP46P62068 AC022217.4-201ENST00000604389 163 ntBASIC4.12□□□□□ -1.75
USP46P62068 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP46P62068 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP46P62068 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.11□□□□□ -1.75
USP46P62068 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP46P62068 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
USP46P62068 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP46P62068 SNORA51.10-201ENST00000384418 136 ntBASIC4.11□□□□□ -1.75
USP46P62068 SNORA3C-201ENST00000408792 125 ntBASIC4.11□□□□□ -1.75
USP46P62068 SNRPGP10-201ENST00000432323 225 ntBASIC4.11□□□□□ -1.75
USP46P62068 RN7SL271P-201ENST00000487601 295 ntBASIC4.11□□□□□ -1.75
USP46P62068 COX6CP6-201ENST00000490840 228 ntBASIC4.11□□□□□ -1.75
USP46P62068 HMGN1P7-201ENST00000491722 313 ntBASIC4.11□□□□□ -1.75
USP46P62068 RNU6-693P-201ENST00000516134 107 ntBASIC4.11□□□□□ -1.75
USP46P62068 Y_RNA.666-201ENST00000516187 112 ntBASIC4.11□□□□□ -1.75
USP46P62068 MIR3158-1-201ENST00000583596 81 ntBASIC4.11□□□□□ -1.75
USP46P62068 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.11□□□□□ -1.75
USP46P62068 AL121772.2-201ENST00000614331 297 ntBASIC4.11□□□□□ -1.75
USP46P62068 UCA1.1-201ENST00000620952 75 ntBASIC4.11□□□□□ -1.75
USP46P62068 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.11□□□□□ -1.75
USP46P62068 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP46P62068 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP46P62068 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms