Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNU6-763P-201ENST00000390865 106 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 RNU6-57P-201ENST00000411348 103 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 COX6CP10-201ENST00000416832 224 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 AL135790.2-201ENST00000437701 267 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 SUMO1P3-201ENST00000439961 304 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 AC074290.1-201ENST00000448883 135 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 HMGN2P18-201ENST00000450680 270 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 RPS29P2-201ENST00000479278 136 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.66□□□□□ -1.98
CLRN1P58418 RNA5SP380-201ENST00000517190 98 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.66□□□□□ -1.98
CLRN1P58418 AC022559.1-201ENST00000520905 205 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 AC022616.8-201ENST00000533569 253 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.66□□□□□ -1.98
CLRN1P58418 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.66□□□□□ -1.98
CLRN1P58418 AC007318.2-201ENST00000620999 243 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 snoZ196.1-201ENST00000625269 89 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 AC093831.2-201ENST00000624393 3427 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.66□□□□□ -1.98
CLRN1P58418 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLRN1P58418 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
CLRN1P58418 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
CLRN1P58418 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CLRN1P58418 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.65□□□□□ -1.99
CLRN1P58418 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.65□□□□□ -1.99
CLRN1P58418 AC073325.2-201ENST00000339545 159 ntBASIC2.65□□□□□ -1.99
CLRN1P58418 Y_RNA.180-201ENST00000363867 113 ntBASIC2.65□□□□□ -1.99
CLRN1P58418 SNORA70.4-201ENST00000365509 134 ntBASIC2.65□□□□□ -1.99
CLRN1P58418 Y_RNA.361-201ENST00000365515 120 ntBASIC2.65□□□□□ -1.99
CLRN1P58418 RNU6-438P-201ENST00000365561 103 ntBASIC2.65□□□□□ -1.99
CLRN1P58418 RNU6-418P-201ENST00000384035 107 ntBASIC2.65□□□□□ -1.99
CLRN1P58418 RNU6-220P-201ENST00000390919 107 ntBASIC2.65□□□□□ -1.99
CLRN1P58418 AL603908.1-201ENST00000406098 201 ntBASIC2.65□□□□□ -1.99
CLRN1P58418 RNU6-710P-201ENST00000410424 105 ntBASIC2.65□□□□□ -1.99
CLRN1P58418 SUMO1P2-201ENST00000452524 304 ntBASIC2.65□□□□□ -1.99
CLRN1P58418 AC016925.1-201ENST00000458303 298 ntBASIC2.65□□□□□ -1.99
CLRN1P58418 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.65□□□□□ -1.99
CLRN1P58418 AC008885.1-201ENST00000514930 301 ntBASIC2.65□□□□□ -1.99
CLRN1P58418 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.65□□□□□ -1.99
CLRN1P58418 AC136628.3-201ENST00000521868 290 ntBASIC2.65□□□□□ -1.99
CLRN1P58418 AL365434.2-201ENST00000607979 234 ntBASIC2.65□□□□□ -1.99
CLRN1P58418 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLRN1P58418 AC073346.2-201ENST00000624724 2058 ntBASIC2.65□□□□□ -1.99
CLRN1P58418 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CLRN1P58418 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.64□□□□□ -1.99
CLRN1P58418 AC092435.3-201ENST00000565538 3654 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 RNU6-461P-201ENST00000364195 107 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 RNA5SP387-201ENST00000364226 106 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 Y_RNA.262-201ENST00000364641 102 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 Y_RNA.304-201ENST00000365011 112 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 RNA5SP240-201ENST00000365355 128 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 PCNPP3-201ENST00000393579 471 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 RNU6-855P-201ENST00000410395 104 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 RN7SKP220-201ENST00000410611 288 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 OOSP1P1-201ENST00000423265 274 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.64□□□□□ -1.99
CLRN1P58418 U8.19-201ENST00000459095 133 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 RNU6-221P-201ENST00000459541 99 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 RNA5SP385-201ENST00000515947 110 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 RNA5SP490-201ENST00000517141 136 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 SNORA70.24-201ENST00000517233 118 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.64□□□□□ -1.99
CLRN1P58418 AP005660.1-201ENST00000522972 293 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 AC087441.2-201ENST00000529141 262 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.64□□□□□ -1.99
CLRN1P58418 AC107016.2-201ENST00000547968 190 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 PRELID2P1-201ENST00000552837 301 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.64□□□□□ -1.99
CLRN1P58418 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.64□□□□□ -1.99
CLRN1P58418 MIR3684-201ENST00000579779 74 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 MIR4506-201ENST00000584693 77 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.64□□□□□ -1.99
CLRN1P58418 AL356280.1-201ENST00000603614 379 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 AC007179.3-201ENST00000604976 235 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.64□□□□□ -1.99
CLRN1P58418 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLRN1P58418 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.64□□□□□ -1.99
CLRN1P58418 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.63□□□□□ -1.99
CLRN1P58418 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CLRN1P58418 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CLRN1P58418 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.63□□□□□ -1.99
CLRN1P58418 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CLRN1P58418 RNA5SP374-201ENST00000362939 125 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 RNU6-653P-201ENST00000363074 106 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 RNU6-525P-201ENST00000363685 104 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 RNU6-682P-201ENST00000363843 106 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 SNORA26.5-201ENST00000391215 123 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 RNU6-918P-201ENST00000391219 106 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 RNU6-493P-201ENST00000391321 108 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 AL031121.1-201ENST00000406553 254 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 AL355796.1-201ENST00000406706 323 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 RNU2-63P-201ENST00000410792 194 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 BMS1P22-201ENST00000414726 313 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 AL513477.1-202ENST00000417061 214 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 HMGB3P3-201ENST00000510526 400 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 RNU6-948P-201ENST00000516374 107 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 RNU6-861P-201ENST00000516745 106 ntBASIC2.63□□□□□ -1.99
CLRN1P58418 SNORA48.11-201ENST00000517015 89 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 271.1 ms