Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.76□□□□□ -2.29
CLDN18P56856 AL390123.1-201ENST00000603216 237 ntBASIC0.76□□□□□ -2.29
CLDN18P56856 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
CLDN18P56856 AP000568.1-201ENST00000282964 442 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 RNU6-82P-201ENST00000363970 107 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 RNU6-42P-201ENST00000384165 107 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 SNORA67.2-201ENST00000384300 149 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 RNY1P14-201ENST00000384426 108 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 RNY3P9-201ENST00000384727 106 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 MIR487A-201ENST00000385009 80 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 MIR660-201ENST00000385235 97 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 SNORD12-201ENST00000391002 90 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 RNU6-1158P-201ENST00000391167 107 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 MIR942-201ENST00000401111 86 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 AL049545.1-201ENST00000401856 572 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 AL451046.2-201ENST00000403074 277 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 AL355796.1-201ENST00000406706 323 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 RN7SKP142-201ENST00000411236 328 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 RNU6-1054P-201ENST00000411293 104 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.75□□□□□ -2.29
CLDN18P56856 AL445567.1-201ENST00000439121 144 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.75□□□□□ -2.29
CLDN18P56856 AC245047.7-201ENST00000440265 293 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 STAG3L5P-204ENST00000443759 179 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 RPL39P39-201ENST00000455840 151 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 RNU7-94P-201ENST00000459576 63 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 RPL23AP75-201ENST00000491601 451 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 MTCO1P29-201ENST00000496868 288 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.75□□□□□ -2.29
CLDN18P56856 RNU6-322P-201ENST00000516010 103 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 SNORA19.2-201ENST00000516013 114 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.75□□□□□ -2.29
CLDN18P56856 AC004584.2-201ENST00000570407 410 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 MIR5692C1-201ENST00000585309 91 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 AC007684.1-201ENST00000609671 477 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 MIR6788-201ENST00000618842 66 ntBASIC0.75□□□□□ -2.29
CLDN18P56856 RNU6-199P-201ENST00000362954 107 ntBASIC0.74□□□□□ -2.29
CLDN18P56856 Y_RNA.355-201ENST00000365462 98 ntBASIC0.74□□□□□ -2.29
CLDN18P56856 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
CLDN18P56856 MIR450B-201ENST00000401182 78 ntBASIC0.74□□□□□ -2.29
CLDN18P56856 MIR548J-201ENST00000408833 112 ntBASIC0.74□□□□□ -2.29
CLDN18P56856 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.74□□□□□ -2.29
CLDN18P56856 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.74□□□□□ -2.29
CLDN18P56856 AC092436.3-201ENST00000511788 257 ntBASIC0.74□□□□□ -2.29
CLDN18P56856 RNU7-99P-201ENST00000516271 62 ntBASIC0.74□□□□□ -2.29
CLDN18P56856 RN7SKP49-201ENST00000516675 260 ntBASIC0.74□□□□□ -2.29
CLDN18P56856 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.74□□□□□ -2.29
CLDN18P56856 AC007834.2-201ENST00000536310 343 ntBASIC0.74□□□□□ -2.29
CLDN18P56856 SNORA4-201ENST00000584302 138 ntBASIC0.74□□□□□ -2.29
CLDN18P56856 MIR4424-201ENST00000585257 86 ntBASIC0.74□□□□□ -2.29
CLDN18P56856 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.74□□□□□ -2.29
CLDN18P56856 SNORA28-201ENST00000606769 126 ntBASIC0.74□□□□□ -2.29
CLDN18P56856 AC108706.1-201ENST00000611053 297 ntBASIC0.74□□□□□ -2.29
CLDN18P56856 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.74□□□□□ -2.29
CLDN18P56856 RNU6-784P-201ENST00000384330 106 ntBASIC0.73□□□□□ -2.29
CLDN18P56856 MIR200A-201ENST00000384875 90 ntBASIC0.73□□□□□ -2.29
CLDN18P56856 AL606489.2-201ENST00000433886 234 ntBASIC0.73□□□□□ -2.29
CLDN18P56856 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.73□□□□□ -2.29
CLDN18P56856 MTND3P7-201ENST00000474435 343 ntBASIC0.73□□□□□ -2.29
CLDN18P56856 SNORD79.1-201ENST00000516069 84 ntBASIC0.73□□□□□ -2.29
CLDN18P56856 SNORA25.14-201ENST00000516481 132 ntBASIC0.73□□□□□ -2.29
CLDN18P56856 RNU6-197P-201ENST00000516680 100 ntBASIC0.73□□□□□ -2.29
CLDN18P56856 AC136628.3-201ENST00000521868 290 ntBASIC0.73□□□□□ -2.29
CLDN18P56856 AC011604.1-201ENST00000545978 196 ntBASIC0.73□□□□□ -2.29
CLDN18P56856 AL121579.1-201ENST00000555129 305 ntBASIC0.73□□□□□ -2.29
CLDN18P56856 MIR151B-201ENST00000584249 96 ntBASIC0.73□□□□□ -2.29
CLDN18P56856 AC022432.1-201ENST00000595739 310 ntBASIC0.73□□□□□ -2.29
CLDN18P56856 AC073648.5-201ENST00000603502 305 ntBASIC0.73□□□□□ -2.29
CLDN18P56856 U6.73-201ENST00000619194 103 ntBASIC0.73□□□□□ -2.29
CLDN18P56856 MIR6734-201ENST00000621166 68 ntBASIC0.73□□□□□ -2.29
CLDN18P56856 Y_RNA.118-201ENST00000363300 101 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 SNORD87-201ENST00000364849 89 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 Y_RNA.296-201ENST00000364930 108 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 Y_RNA.378-201ENST00000365652 113 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 RNU6-245P-201ENST00000384020 107 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 SNORA80D-201ENST00000384488 135 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 AL590002.1-201ENST00000406554 418 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 AL663109.1-201ENST00000411498 844 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 RPS3AP1-201ENST00000413190 320 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.72□□□□□ -2.29
CLDN18P56856 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.72□□□□□ -2.29
CLDN18P56856 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 AC004941.2-201ENST00000427009 228 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.72□□□□□ -2.29
CLDN18P56856 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.72□□□□□ -2.29
CLDN18P56856 AL031667.1-201ENST00000440222 725 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 AL353572.1-201ENST00000442490 417 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 RPS4XP11-201ENST00000446897 772 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.72□□□□□ -2.29
CLDN18P56856 TRBVA-201ENST00000498804 316 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.72□□□□□ -2.29
CLDN18P56856 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 RNU6-1332P-201ENST00000516666 104 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 RNU6-1198P-201ENST00000516904 67 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 MTND1P5-201ENST00000517906 940 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.72□□□□□ -2.29
CLDN18P56856 CYP3A137P-201ENST00000562436 69 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 MIR4528-201ENST00000577763 90 ntBASIC0.72□□□□□ -2.29
CLDN18P56856 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms