Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 SNORA12-201ENST00000391162 147 ntBASIC4.74□□□□□ -1.65
PRIM1P49642 MIR1294-201ENST00000408503 142 ntBASIC4.74□□□□□ -1.65
PRIM1P49642 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.74□□□□□ -1.65
PRIM1P49642 AC112771.1-201ENST00000463581 102 ntBASIC4.74□□□□□ -1.65
PRIM1P49642 RPL27AP5-201ENST00000469428 449 ntBASIC4.74□□□□□ -1.65
PRIM1P49642 OR9P1P-201ENST00000496431 281 ntBASIC4.74□□□□□ -1.65
PRIM1P49642 RNU6-948P-201ENST00000516374 107 ntBASIC4.74□□□□□ -1.65
PRIM1P49642 RNU2-58P-201ENST00000516403 183 ntBASIC4.74□□□□□ -1.65
PRIM1P49642 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.74□□□□□ -1.65
PRIM1P49642 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRIM1P49642 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.74□□□□□ -1.65
PRIM1P49642 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.74□□□□□ -1.65
PRIM1P49642 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PRIM1P49642 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRIM1P49642 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PRIM1P49642 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRIM1P49642 RNU6-198P-201ENST00000384258 104 ntBASIC4.73□□□□□ -1.65
PRIM1P49642 Y_RNA.558-201ENST00000384685 113 ntBASIC4.73□□□□□ -1.65
PRIM1P49642 RNU7-14P-201ENST00000459331 62 ntBASIC4.73□□□□□ -1.65
PRIM1P49642 RNU6-365P-201ENST00000517113 106 ntBASIC4.73□□□□□ -1.65
PRIM1P49642 AC015720.1-201ENST00000565251 277 ntBASIC4.73□□□□□ -1.65
PRIM1P49642 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.73□□□□□ -1.65
PRIM1P49642 RPL23AP91-201ENST00000569211 455 ntBASIC4.73□□□□□ -1.65
PRIM1P49642 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.73□□□□□ -1.65
PRIM1P49642 MIR7112-201ENST00000616126 65 ntBASIC4.73□□□□□ -1.65
PRIM1P49642 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.73□□□□□ -1.65
PRIM1P49642 AP000553.6-201ENST00000641242 118 ntBASIC4.73□□□□□ -1.65
PRIM1P49642 AC002546.1-201ENST00000588041 2504 ntBASIC4.73□□□□□ -1.65
PRIM1P49642 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.72□□□□□ -1.65
PRIM1P49642 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRIM1P49642 Y_RNA.91-201ENST00000363042 107 ntBASIC4.72□□□□□ -1.65
PRIM1P49642 MIR570-201ENST00000384917 97 ntBASIC4.72□□□□□ -1.65
PRIM1P49642 RPL23AP94-201ENST00000512518 302 ntBASIC4.72□□□□□ -1.65
PRIM1P49642 MIR6852-201ENST00000621699 66 ntBASIC4.72□□□□□ -1.65
PRIM1P49642 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
PRIM1P49642 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRIM1P49642 AC010680.1-201ENST00000590024 3590 ntBASIC4.72□□□□□ -1.65
PRIM1P49642 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.72□□□□□ -1.65
PRIM1P49642 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
PRIM1P49642 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.72□□□□□ -1.65
PRIM1P49642 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PRIM1P49642 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRIM1P49642 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRIM1P49642 Y_RNA.85-201ENST00000363014 111 ntBASIC4.71□□□□□ -1.66
PRIM1P49642 SNORD73B-201ENST00000364394 72 ntBASIC4.71□□□□□ -1.66
PRIM1P49642 Y_RNA.242-201ENST00000364473 110 ntBASIC4.71□□□□□ -1.66
PRIM1P49642 RNA5SP125-201ENST00000364843 120 ntBASIC4.71□□□□□ -1.66
PRIM1P49642 RNU6-294P-201ENST00000364999 102 ntBASIC4.71□□□□□ -1.66
PRIM1P49642 RNA5SP511-201ENST00000410487 115 ntBASIC4.71□□□□□ -1.66
PRIM1P49642 ATP5EP1-201ENST00000510257 156 ntBASIC4.71□□□□□ -1.66
PRIM1P49642 RNU2-34P-201ENST00000516534 121 ntBASIC4.71□□□□□ -1.66
PRIM1P49642 RNU6-504P-201ENST00000516568 104 ntBASIC4.71□□□□□ -1.66
PRIM1P49642 MIR7851-201ENST00000610611 160 ntBASIC4.71□□□□□ -1.66
PRIM1P49642 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.71□□□□□ -1.66
PRIM1P49642 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PRIM1P49642 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.71□□□□□ -1.66
PRIM1P49642 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.71□□□□□ -1.66
PRIM1P49642 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
PRIM1P49642 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.7□□□□□ -1.66
PRIM1P49642 Y_RNA.49-201ENST00000362714 112 ntBASIC4.7□□□□□ -1.66
PRIM1P49642 RNU6-117P-201ENST00000365415 107 ntBASIC4.7□□□□□ -1.66
PRIM1P49642 SNORD17-201ENST00000390930 237 ntBASIC4.7□□□□□ -1.66
PRIM1P49642 RNU6-554P-201ENST00000410466 106 ntBASIC4.7□□□□□ -1.66
PRIM1P49642 SNORD11-201ENST00000459124 84 ntBASIC4.7□□□□□ -1.66
PRIM1P49642 AC025647.1-201ENST00000517879 253 ntBASIC4.7□□□□□ -1.66
PRIM1P49642 AC007012.1-201ENST00000567192 175 ntBASIC4.7□□□□□ -1.66
PRIM1P49642 Pinc.1-201ENST00000616452 154 ntBASIC4.7□□□□□ -1.66
PRIM1P49642 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.7□□□□□ -1.66
PRIM1P49642 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.7□□□□□ -1.66
PRIM1P49642 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRIM1P49642 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.7□□□□□ -1.66
PRIM1P49642 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PRIM1P49642 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
PRIM1P49642 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRIM1P49642 U8.6-201ENST00000364939 135 ntBASIC4.69□□□□□ -1.66
PRIM1P49642 RNU6-1292P-201ENST00000383856 107 ntBASIC4.69□□□□□ -1.66
PRIM1P49642 RNU6-756P-201ENST00000383997 107 ntBASIC4.69□□□□□ -1.66
PRIM1P49642 MIR562-201ENST00000384894 95 ntBASIC4.69□□□□□ -1.66
PRIM1P49642 AL031121.1-201ENST00000406553 254 ntBASIC4.69□□□□□ -1.66
PRIM1P49642 RNU6-57P-201ENST00000411348 103 ntBASIC4.69□□□□□ -1.66
PRIM1P49642 AC097463.2-201ENST00000421074 142 ntBASIC4.69□□□□□ -1.66
PRIM1P49642 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.69□□□□□ -1.66
PRIM1P49642 RPS29P21-201ENST00000496272 170 ntBASIC4.69□□□□□ -1.66
PRIM1P49642 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
PRIM1P49642 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRIM1P49642 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRIM1P49642 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRIM1P49642 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRIM1P49642 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRIM1P49642 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
PRIM1P49642 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRIM1P49642 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.69□□□□□ -1.66
PRIM1P49642 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.68□□□□□ -1.66
PRIM1P49642 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PRIM1P49642 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRIM1P49642 AC000403.1-201ENST00000613696 3585 ntBASIC4.68□□□□□ -1.66
PRIM1P49642 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRIM1P49642 SNORD31B-201ENST00000364977 69 ntBASIC4.68□□□□□ -1.66
PRIM1P49642 RNU6-1235P-201ENST00000384559 107 ntBASIC4.68□□□□□ -1.66
PRIM1P49642 Y_RNA.528-201ENST00000384575 108 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms