Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MIR6716-201ENST00000613413 80 ntBASIC4.33□□□□□ -1.72
CLCN1P35523 Pinc.1-201ENST00000616452 154 ntBASIC4.33□□□□□ -1.72
CLCN1P35523 AC110079.1-202ENST00000635213 138 ntBASIC4.33□□□□□ -1.72
CLCN1P35523 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCN1P35523 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCN1P35523 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CLCN1P35523 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCN1P35523 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLCN1P35523 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCN1P35523 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCN1P35523 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLCN1P35523 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCN1P35523 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCN1P35523 SNORD35B-201ENST00000363660 87 ntBASIC4.32□□□□□ -1.72
CLCN1P35523 Y_RNA.796-201ENST00000364268 102 ntBASIC4.32□□□□□ -1.72
CLCN1P35523 Y_RNA.799-201ENST00000364992 102 ntBASIC4.32□□□□□ -1.72
CLCN1P35523 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLCN1P35523 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCN1P35523 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.32□□□□□ -1.72
CLCN1P35523 RPL29P14-201ENST00000495837 428 ntBASIC4.32□□□□□ -1.72
CLCN1P35523 AC025627.2-201ENST00000576220 160 ntBASIC4.32□□□□□ -1.72
CLCN1P35523 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCN1P35523 AL121890.5-201ENST00000620848 304 ntBASIC4.32□□□□□ -1.72
CLCN1P35523 MIR1248-201ENST00000629190 106 ntBASIC4.32□□□□□ -1.72
CLCN1P35523 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CLCN1P35523 U6.98-201ENST00000637157 84 ntBASIC4.32□□□□□ -1.72
CLCN1P35523 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCN1P35523 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCN1P35523 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCN1P35523 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CLCN1P35523 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCN1P35523 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
CLCN1P35523 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CLCN1P35523 RNA5SP267-201ENST00000364893 126 ntBASIC4.31□□□□□ -1.72
CLCN1P35523 SNORA73.2-201ENST00000364946 201 ntBASIC4.31□□□□□ -1.72
CLCN1P35523 SNORD58C-201ENST00000365223 64 ntBASIC4.31□□□□□ -1.72
CLCN1P35523 AL359837.1-201ENST00000381357 287 ntBASIC4.31□□□□□ -1.72
CLCN1P35523 RNU6-147P-201ENST00000383983 107 ntBASIC4.31□□□□□ -1.72
CLCN1P35523 SNORD116-21-201ENST00000384507 92 ntBASIC4.31□□□□□ -1.72
CLCN1P35523 AC063976.4-201ENST00000421971 163 ntBASIC4.31□□□□□ -1.72
CLCN1P35523 AC063976.3-201ENST00000426849 329 ntBASIC4.31□□□□□ -1.72
CLCN1P35523 AC010618.1-201ENST00000469924 477 ntBASIC4.31□□□□□ -1.72
CLCN1P35523 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCN1P35523 RNU7-149P-201ENST00000516739 59 ntBASIC4.31□□□□□ -1.72
CLCN1P35523 AC090115.4-201ENST00000609970 188 ntBASIC4.31□□□□□ -1.72
CLCN1P35523 JPX_2.1-201ENST00000614161 69 ntBASIC4.31□□□□□ -1.72
CLCN1P35523 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLCN1P35523 AL353746.1-201ENST00000566293 6881 ntBASIC4.31□□□□□ -1.72
CLCN1P35523 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLCN1P35523 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.3□□□□□ -1.72
CLCN1P35523 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLCN1P35523 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.3□□□□□ -1.72
CLCN1P35523 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CLCN1P35523 MIR30E-201ENST00000362104 92 ntBASIC4.3□□□□□ -1.72
CLCN1P35523 SNORA60-201ENST00000362396 134 ntBASIC4.3□□□□□ -1.72
CLCN1P35523 RPS12P18-201ENST00000442381 270 ntBASIC4.3□□□□□ -1.72
CLCN1P35523 AC092185.1-201ENST00000491371 97 ntBASIC4.3□□□□□ -1.72
CLCN1P35523 OR9P1P-201ENST00000496431 281 ntBASIC4.3□□□□□ -1.72
CLCN1P35523 RNU6-126P-201ENST00000516685 103 ntBASIC4.3□□□□□ -1.72
CLCN1P35523 RNA5SP380-201ENST00000517190 98 ntBASIC4.3□□□□□ -1.72
CLCN1P35523 SCARNA11.3-201ENST00000517276 130 ntBASIC4.3□□□□□ -1.72
CLCN1P35523 RNU2-60P-201ENST00000517290 128 ntBASIC4.3□□□□□ -1.72
CLCN1P35523 MIR4474-201ENST00000579189 78 ntBASIC4.3□□□□□ -1.72
CLCN1P35523 MIR4662B-201ENST00000579498 81 ntBASIC4.3□□□□□ -1.72
CLCN1P35523 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLCN1P35523 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCN1P35523 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.3□□□□□ -1.72
CLCN1P35523 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLCN1P35523 GABRG2-229ENST00000641017 3628 ntBASIC4.29□□□□□ -1.72
CLCN1P35523 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.29□□□□□ -1.72
CLCN1P35523 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN1P35523 MFSD8-236ENST00000641509 4050 ntBASIC4.29□□□□□ -1.72
CLCN1P35523 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN1P35523 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN1P35523 RNU6-309P-201ENST00000364573 106 ntBASIC4.29□□□□□ -1.72
CLCN1P35523 MIR562-201ENST00000384894 95 ntBASIC4.29□□□□□ -1.72
CLCN1P35523 MIR218-1-201ENST00000384999 110 ntBASIC4.29□□□□□ -1.72
CLCN1P35523 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.29□□□□□ -1.72
CLCN1P35523 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCN1P35523 RPS26P45-201ENST00000471748 340 ntBASIC4.29□□□□□ -1.72
CLCN1P35523 AC007224.1-201ENST00000564410 144 ntBASIC4.29□□□□□ -1.72
CLCN1P35523 VN1R85P-201ENST00000601587 426 ntBASIC4.29□□□□□ -1.72
CLCN1P35523 MIR6868-201ENST00000611215 58 ntBASIC4.29□□□□□ -1.72
CLCN1P35523 AC002064.3-201ENST00000623448 346 ntBASIC4.29□□□□□ -1.72
CLCN1P35523 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CLCN1P35523 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN1P35523 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.29□□□□□ -1.72
CLCN1P35523 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN1P35523 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCN1P35523 RNU6-1255P-201ENST00000363434 112 ntBASIC4.28□□□□□ -1.72
CLCN1P35523 RNU6-743P-201ENST00000364151 106 ntBASIC4.28□□□□□ -1.72
CLCN1P35523 RNA5SP130-201ENST00000364431 114 ntBASIC4.28□□□□□ -1.72
CLCN1P35523 MIR1253-201ENST00000408273 105 ntBASIC4.28□□□□□ -1.72
CLCN1P35523 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCN1P35523 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.28□□□□□ -1.72
CLCN1P35523 NDUFB1P1-201ENST00000435191 180 ntBASIC4.28□□□□□ -1.72
CLCN1P35523 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.28□□□□□ -1.72
CLCN1P35523 AC091178.2-201ENST00000584401 117 ntBASIC4.28□□□□□ -1.72
CLCN1P35523 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLCN1P35523 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms