Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RNA5SP42-201ENST00000364278 115 ntBASIC3.04□□□□□ -1.92
VAMP1P23763 RNA5SP509-201ENST00000364577 119 ntBASIC3.04□□□□□ -1.92
VAMP1P23763 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
VAMP1P23763 SNORD58.1-201ENST00000391313 66 ntBASIC3.04□□□□□ -1.92
VAMP1P23763 RNU2-14P-201ENST00000411053 191 ntBASIC3.04□□□□□ -1.92
VAMP1P23763 Y_RNA.626-201ENST00000411288 95 ntBASIC3.04□□□□□ -1.92
VAMP1P23763 AL138752.1-201ENST00000452964 351 ntBASIC3.04□□□□□ -1.92
VAMP1P23763 SNORD2.1-201ENST00000458762 69 ntBASIC3.04□□□□□ -1.92
VAMP1P23763 RNU7-115P-201ENST00000516433 55 ntBASIC3.04□□□□□ -1.92
VAMP1P23763 AC024405.2-202ENST00000532731 184 ntBASIC3.04□□□□□ -1.92
VAMP1P23763 AC015720.1-201ENST00000565251 277 ntBASIC3.04□□□□□ -1.92
VAMP1P23763 AC130289.1-201ENST00000577321 73 ntBASIC3.04□□□□□ -1.92
VAMP1P23763 MIR4282-201ENST00000583613 67 ntBASIC3.04□□□□□ -1.92
VAMP1P23763 AC112484.5-201ENST00000624189 228 ntBASIC3.04□□□□□ -1.92
VAMP1P23763 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
VAMP1P23763 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
VAMP1P23763 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VAMP1P23763 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VAMP1P23763 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VAMP1P23763 RNY1-201ENST00000364228 113 ntBASIC3.03□□□□□ -1.92
VAMP1P23763 Y_RNA.267-201ENST00000364679 109 ntBASIC3.03□□□□□ -1.92
VAMP1P23763 U8.7-201ENST00000364940 136 ntBASIC3.03□□□□□ -1.92
VAMP1P23763 RNU6-1323P-201ENST00000384025 107 ntBASIC3.03□□□□□ -1.92
VAMP1P23763 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
VAMP1P23763 Y_RNA.793-201ENST00000411222 111 ntBASIC3.03□□□□□ -1.92
VAMP1P23763 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.03□□□□□ -1.92
VAMP1P23763 AC069257.2-201ENST00000441819 155 ntBASIC3.03□□□□□ -1.92
VAMP1P23763 COX6CP14-201ENST00000469580 174 ntBASIC3.03□□□□□ -1.92
VAMP1P23763 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.03□□□□□ -1.92
VAMP1P23763 RNU6-138P-201ENST00000515952 107 ntBASIC3.03□□□□□ -1.92
VAMP1P23763 RNU2-27P-201ENST00000516185 142 ntBASIC3.03□□□□□ -1.92
VAMP1P23763 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.03□□□□□ -1.92
VAMP1P23763 RNU6-1096P-201ENST00000517089 102 ntBASIC3.03□□□□□ -1.92
VAMP1P23763 RNU1-104P-201ENST00000517280 175 ntBASIC3.03□□□□□ -1.92
VAMP1P23763 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.03□□□□□ -1.92
VAMP1P23763 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
VAMP1P23763 AC068647.1-201ENST00000489539 2265 ntBASIC3.03□□□□□ -1.92
VAMP1P23763 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.02□□□□□ -1.93
VAMP1P23763 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VAMP1P23763 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
VAMP1P23763 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
VAMP1P23763 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.02□□□□□ -1.93
VAMP1P23763 RNA5SP505-201ENST00000364748 108 ntBASIC3.02□□□□□ -1.93
VAMP1P23763 RNU1-51P-201ENST00000365345 176 ntBASIC3.02□□□□□ -1.93
VAMP1P23763 RNU6-117P-201ENST00000365415 107 ntBASIC3.02□□□□□ -1.93
VAMP1P23763 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VAMP1P23763 RNU6-144P-201ENST00000383951 107 ntBASIC3.02□□□□□ -1.93
VAMP1P23763 AL355497.1-201ENST00000406262 551 ntBASIC3.02□□□□□ -1.93
VAMP1P23763 SNORA36B-201ENST00000410438 131 ntBASIC3.02□□□□□ -1.93
VAMP1P23763 RNU2-7P-201ENST00000410794 178 ntBASIC3.02□□□□□ -1.93
VAMP1P23763 RNA5SP344-201ENST00000411081 104 ntBASIC3.02□□□□□ -1.93
VAMP1P23763 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.02□□□□□ -1.93
VAMP1P23763 RNU7-193P-201ENST00000516723 65 ntBASIC3.02□□□□□ -1.93
VAMP1P23763 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.02□□□□□ -1.93
VAMP1P23763 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
VAMP1P23763 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.02□□□□□ -1.93
VAMP1P23763 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.02□□□□□ -1.93
VAMP1P23763 Y_RNA.802-201ENST00000614892 130 ntBASIC3.02□□□□□ -1.93
VAMP1P23763 U1.36-201ENST00000620684 176 ntBASIC3.02□□□□□ -1.93
VAMP1P23763 AL365265.1-201ENST00000621045 234 ntBASIC3.02□□□□□ -1.93
VAMP1P23763 AC022149.2-201ENST00000621061 203 ntBASIC3.02□□□□□ -1.93
VAMP1P23763 AC012442.3-202ENST00000636742 206 ntBASIC3.02□□□□□ -1.93
VAMP1P23763 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.02□□□□□ -1.93
VAMP1P23763 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.02□□□□□ -1.93
VAMP1P23763 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.02□□□□□ -1.93
VAMP1P23763 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
VAMP1P23763 Y_RNA.308-201ENST00000365043 101 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 RNY4P28-201ENST00000365281 93 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 SNORA72-201ENST00000384339 132 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 SNORA8.3-201ENST00000384679 139 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 AL117342.1-201ENST00000404861 406 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.01□□□□□ -1.93
VAMP1P23763 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.01□□□□□ -1.93
VAMP1P23763 AC109925.1-201ENST00000478069 331 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 AC091167.1-201ENST00000492017 396 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 AL163195.1-201ENST00000496941 348 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 FCF1P8-201ENST00000510322 597 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 AC068657.1-201ENST00000520807 306 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.01□□□□□ -1.93
VAMP1P23763 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.01□□□□□ -1.93
VAMP1P23763 MIR4724-201ENST00000579485 89 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 AP003357.1-201ENST00000604497 148 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 AC114781.5-201ENST00000615297 108 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 MIR6079-201ENST00000635807 62 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.01□□□□□ -1.93
VAMP1P23763 AP000553.6-201ENST00000641242 118 ntBASIC3.01□□□□□ -1.93
VAMP1P23763 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3□□□□□ -1.93
VAMP1P23763 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VAMP1P23763 AC018630.2-201ENST00000534866 2403 ntBASIC3□□□□□ -1.93
VAMP1P23763 ZNF271P-202ENST00000465539 1970 ntBASIC3□□□□□ -1.93
VAMP1P23763 MIR411-201ENST00000362239 96 ntBASIC3□□□□□ -1.93
VAMP1P23763 SNORA33-201ENST00000363664 130 ntBASIC3□□□□□ -1.93
VAMP1P23763 RNU6-525P-201ENST00000363685 104 ntBASIC3□□□□□ -1.93
VAMP1P23763 SNORA67.1-201ENST00000364749 141 ntBASIC3□□□□□ -1.93
VAMP1P23763 Y_RNA.304-201ENST00000365011 112 ntBASIC3□□□□□ -1.93
VAMP1P23763 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3□□□□□ -1.93
VAMP1P23763 HMGN2P35-201ENST00000412164 270 ntBASIC3□□□□□ -1.93
VAMP1P23763 AC016397.1-201ENST00000412463 242 ntBASIC3□□□□□ -1.93
VAMP1P23763 AL590762.4-201ENST00000425885 253 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms