Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RNA5SP240-201ENST00000365355 128 ntBASIC2.13□□□□□ -2.07
CDH1P12830 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CDH1P12830 RNU6-1072P-201ENST00000384703 107 ntBASIC2.13□□□□□ -2.07
CDH1P12830 RNU6-443P-201ENST00000384780 107 ntBASIC2.13□□□□□ -2.07
CDH1P12830 AL079342.1-201ENST00000401460 267 ntBASIC2.13□□□□□ -2.07
CDH1P12830 MIR1294-201ENST00000408503 142 ntBASIC2.13□□□□□ -2.07
CDH1P12830 Y_RNA.595-201ENST00000410403 105 ntBASIC2.13□□□□□ -2.07
CDH1P12830 RNA5SP504-201ENST00000410676 117 ntBASIC2.13□□□□□ -2.07
CDH1P12830 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.13□□□□□ -2.07
CDH1P12830 MTCYBP9-201ENST00000431021 303 ntBASIC2.13□□□□□ -2.07
CDH1P12830 IFNA11P-201ENST00000446352 526 ntBASIC2.13□□□□□ -2.07
CDH1P12830 PCNPP5-201ENST00000452246 481 ntBASIC2.13□□□□□ -2.07
CDH1P12830 CYP2C59P-201ENST00000457790 269 ntBASIC2.13□□□□□ -2.07
CDH1P12830 MTCO2P24-201ENST00000515611 426 ntBASIC2.13□□□□□ -2.07
CDH1P12830 RNU6-635P-201ENST00000516651 102 ntBASIC2.13□□□□□ -2.07
CDH1P12830 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.13□□□□□ -2.07
CDH1P12830 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.13□□□□□ -2.07
CDH1P12830 RRN3P3-201ENST00000549207 578 ntBASIC2.13□□□□□ -2.07
CDH1P12830 AC023824.2-201ENST00000566185 400 ntBASIC2.13□□□□□ -2.07
CDH1P12830 AC009831.4-201ENST00000620744 325 ntBASIC2.13□□□□□ -2.07
CDH1P12830 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CDH1P12830 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CDH1P12830 Y_RNA.47-201ENST00000362697 108 ntBASIC2.12□□□□□ -2.07
CDH1P12830 Y_RNA.105-201ENST00000363182 111 ntBASIC2.12□□□□□ -2.07
CDH1P12830 RNU6-727P-201ENST00000363592 107 ntBASIC2.12□□□□□ -2.07
CDH1P12830 RNU6-806P-201ENST00000365147 105 ntBASIC2.12□□□□□ -2.07
CDH1P12830 RNU6-234P-201ENST00000365229 104 ntBASIC2.12□□□□□ -2.07
CDH1P12830 SNORA67.2-201ENST00000384300 149 ntBASIC2.12□□□□□ -2.07
CDH1P12830 Y_RNA.512-201ENST00000384518 102 ntBASIC2.12□□□□□ -2.07
CDH1P12830 RNU2-48P-201ENST00000410694 191 ntBASIC2.12□□□□□ -2.07
CDH1P12830 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.12□□□□□ -2.07
CDH1P12830 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH1P12830 SNORA40.9-201ENST00000515895 93 ntBASIC2.12□□□□□ -2.07
CDH1P12830 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH1P12830 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.12□□□□□ -2.07
CDH1P12830 SNORD53-201ENST00000579969 78 ntBASIC2.12□□□□□ -2.07
CDH1P12830 MIR4435-1-201ENST00000582552 80 ntBASIC2.12□□□□□ -2.07
CDH1P12830 SNORD11B-201ENST00000607707 90 ntBASIC2.12□□□□□ -2.07
CDH1P12830 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.12□□□□□ -2.07
CDH1P12830 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.12□□□□□ -2.07
CDH1P12830 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.12□□□□□ -2.07
CDH1P12830 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.12□□□□□ -2.07
CDH1P12830 Y_RNA.183-201ENST00000363882 113 ntBASIC2.11□□□□□ -2.07
CDH1P12830 RNU6-961P-201ENST00000363893 105 ntBASIC2.11□□□□□ -2.07
CDH1P12830 Y_RNA.415-201ENST00000384012 112 ntBASIC2.11□□□□□ -2.07
CDH1P12830 Y_RNA.439-201ENST00000384119 94 ntBASIC2.11□□□□□ -2.07
CDH1P12830 Y_RNA.574-201ENST00000384766 95 ntBASIC2.11□□□□□ -2.07
CDH1P12830 RNU2-63P-201ENST00000410792 194 ntBASIC2.11□□□□□ -2.07
CDH1P12830 RNU2-32P-201ENST00000411193 191 ntBASIC2.11□□□□□ -2.07
CDH1P12830 RNA5SP508-201ENST00000411327 119 ntBASIC2.11□□□□□ -2.07
CDH1P12830 ELOCP21-201ENST00000412558 336 ntBASIC2.11□□□□□ -2.07
CDH1P12830 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.11□□□□□ -2.07
CDH1P12830 RPS23P5-201ENST00000495419 428 ntBASIC2.11□□□□□ -2.07
CDH1P12830 CKS1BP2-201ENST00000497342 240 ntBASIC2.11□□□□□ -2.07
CDH1P12830 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.11□□□□□ -2.07
CDH1P12830 ATP5EP1-201ENST00000510257 156 ntBASIC2.11□□□□□ -2.07
CDH1P12830 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH1P12830 RNU5F-4P-201ENST00000516581 114 ntBASIC2.11□□□□□ -2.07
CDH1P12830 RNU6-965P-201ENST00000516721 96 ntBASIC2.11□□□□□ -2.07
CDH1P12830 CYCSP23-201ENST00000519781 313 ntBASIC2.11□□□□□ -2.07
CDH1P12830 AC022616.8-201ENST00000533569 253 ntBASIC2.11□□□□□ -2.07
CDH1P12830 AK6P2-201ENST00000549020 471 ntBASIC2.11□□□□□ -2.07
CDH1P12830 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH1P12830 AC233702.2-202ENST00000562547 291 ntBASIC2.11□□□□□ -2.07
CDH1P12830 AC136932.1-201ENST00000574771 208 ntBASIC2.11□□□□□ -2.07
CDH1P12830 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.11□□□□□ -2.07
CDH1P12830 MIR4658-201ENST00000584344 65 ntBASIC2.11□□□□□ -2.07
CDH1P12830 MIR4448-201ENST00000584360 86 ntBASIC2.11□□□□□ -2.07
CDH1P12830 Y_RNA.772-201ENST00000606692 102 ntBASIC2.11□□□□□ -2.07
CDH1P12830 MIR6132-201ENST00000622083 109 ntBASIC2.11□□□□□ -2.07
CDH1P12830 MIR1248-201ENST00000629190 106 ntBASIC2.11□□□□□ -2.07
CDH1P12830 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.11□□□□□ -2.07
CDH1P12830 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CDH1P12830 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDH1P12830 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDH1P12830 AL596028.1-201ENST00000326971 197 ntBASIC2.1□□□□□ -2.07
CDH1P12830 RNU6-238P-201ENST00000363313 106 ntBASIC2.1□□□□□ -2.07
CDH1P12830 Y_RNA.144-201ENST00000363521 113 ntBASIC2.1□□□□□ -2.07
CDH1P12830 Y_RNA.176-201ENST00000363815 109 ntBASIC2.1□□□□□ -2.07
CDH1P12830 RNU6-770P-201ENST00000363929 105 ntBASIC2.1□□□□□ -2.07
CDH1P12830 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.1□□□□□ -2.07
CDH1P12830 RNU6-546P-201ENST00000383991 107 ntBASIC2.1□□□□□ -2.07
CDH1P12830 AL033519.2-201ENST00000403958 392 ntBASIC2.1□□□□□ -2.07
CDH1P12830 RNU6-121P-201ENST00000410525 99 ntBASIC2.1□□□□□ -2.07
CDH1P12830 AL731563.1-201ENST00000442202 214 ntBASIC2.1□□□□□ -2.07
CDH1P12830 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH1P12830 AC018868.1-201ENST00000491307 315 ntBASIC2.1□□□□□ -2.07
CDH1P12830 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.1□□□□□ -2.07
CDH1P12830 AC025465.3-201ENST00000510570 311 ntBASIC2.1□□□□□ -2.07
CDH1P12830 AC074133.1-201ENST00000515696 183 ntBASIC2.1□□□□□ -2.07
CDH1P12830 RNU6-408P-201ENST00000515910 100 ntBASIC2.1□□□□□ -2.07
CDH1P12830 RNA5SP200-201ENST00000516360 103 ntBASIC2.1□□□□□ -2.07
CDH1P12830 Y_RNA.713-201ENST00000517013 96 ntBASIC2.1□□□□□ -2.07
CDH1P12830 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.1□□□□□ -2.07
CDH1P12830 AL355297.2-201ENST00000604792 129 ntBASIC2.1□□□□□ -2.07
CDH1P12830 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.1□□□□□ -2.07
CDH1P12830 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.1□□□□□ -2.07
CDH1P12830 MIR6873-201ENST00000622788 63 ntBASIC2.1□□□□□ -2.07
CDH1P12830 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.1□□□□□ -2.07
CDH1P12830 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms