Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 MTND4P32-201ENST00000437189 1237 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 AC112206.4-201ENST00000515142 405 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 RNU4-49P-201ENST00000516080 140 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 AP002360.4-201ENST00000606980 481 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 SNORA32.2-201ENST00000384049 122 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
COL6A3P12111 SNORD83.1-201ENST00000411362 77 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 RNU7-59P-201ENST00000459101 61 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 AC026421.1-201ENST00000519101 163 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.33□□□□□ -2.46
COL6A3P12111 SNORA59B-202ENST00000578183 701 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 MIR4804-201ENST00000581683 73 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 AL117336.2-201ENST00000602435 335 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 AC078795.3-201ENST00000602913 472 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 AC090186.1-201ENST00000605991 572 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 AL159153.1-201ENST00000619688 317 ntBASIC-0.33□□□□□ -2.46
COL6A3P12111 SNORA72.1-201ENST00000363485 129 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 RNU4-22P-201ENST00000411058 166 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL6A3P12111 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL6A3P12111 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL6A3P12111 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 MED13P1-201ENST00000428342 171 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 AC087499.4-201ENST00000448505 178 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL6A3P12111 RNU6-977P-201ENST00000516411 103 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 RNU1-117P-201ENST00000517041 158 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.34□□□□□ -2.46
COL6A3P12111 BCRP9-201ENST00000605312 388 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 AC096586.1-201ENST00000610267 561 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 AC105081.1-201ENST00000617727 106 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 AL356094.1-201ENST00000624663 1212 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 RNU6-212P-201ENST00000362642 104 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 snoZ40.1-201ENST00000364540 72 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 RNU6-621P-201ENST00000364752 109 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 MIR301A-201ENST00000385261 86 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 MIR454-201ENST00000390180 115 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 USP9YP11-201ENST00000427537 717 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 AL353997.1-201ENST00000432936 108 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 AC092170.1-201ENST00000440211 356 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 MTCO3P43-201ENST00000440974 771 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 HSFY5P-201ENST00000453726 309 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL6A3P12111 RNU6-416P-201ENST00000516265 103 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 RNA5SP135-201ENST00000517019 125 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 RNU6-448P-201ENST00000517052 107 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 SNORA31.19-201ENST00000517079 126 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 AC090502.2-201ENST00000549267 280 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 AL358072.1-201ENST00000604156 575 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 RPL17P51-201ENST00000605218 238 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 AL359075.3-201ENST00000613288 217 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
COL6A3P12111 AC099654.9-201ENST00000637055 678 ntBASIC-0.34□□□□□ -2.46
COL6A3P12111 RNA5SP95-201ENST00000410319 137 ntBASIC-0.35□□□□□ -2.46
COL6A3P12111 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.35□□□□□ -2.46
COL6A3P12111 RPL39P6-201ENST00000448289 150 ntBASIC-0.35□□□□□ -2.46
COL6A3P12111 AC005042.3-201ENST00000453230 174 ntBASIC-0.35□□□□□ -2.46
COL6A3P12111 FABP5P15-201ENST00000453566 214 ntBASIC-0.35□□□□□ -2.46
COL6A3P12111 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.35□□□□□ -2.46
COL6A3P12111 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.35□□□□□ -2.46
COL6A3P12111 RNU6-897P-201ENST00000517135 105 ntBASIC-0.35□□□□□ -2.46
COL6A3P12111 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.35□□□□□ -2.46
COL6A3P12111 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.35□□□□□ -2.46
COL6A3P12111 AC006600.1-201ENST00000572529 153 ntBASIC-0.35□□□□□ -2.46
COL6A3P12111 AL390123.1-201ENST00000603216 237 ntBASIC-0.35□□□□□ -2.46
COL6A3P12111 AC005332.6-201ENST00000613178 446 ntBASIC-0.35□□□□□ -2.46
COL6A3P12111 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.35□□□□□ -2.46
COL6A3P12111 AC106754.1-201ENST00000562632 1513 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 RNU6-161P-201ENST00000363051 106 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 RNU6-142P-201ENST00000384019 107 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.35□□□□□ -2.47
COL6A3P12111 MTND4P15-201ENST00000437913 1033 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 AL606517.2-201ENST00000442855 241 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 AC009237.7-201ENST00000447357 229 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.35□□□□□ -2.47
COL6A3P12111 RPS23P5-201ENST00000495419 428 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 MIR2115-201ENST00000516657 100 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 RNU2-46P-201ENST00000517038 113 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.35□□□□□ -2.47
COL6A3P12111 MIR4771-2-201ENST00000577758 74 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 MIR1273C-201ENST00000578669 77 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 MIR4771-1-201ENST00000582617 74 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 MIR548AD-201ENST00000584780 82 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.35□□□□□ -2.47
COL6A3P12111 AC022217.4-201ENST00000604389 163 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 AC018889.1-201ENST00000605372 397 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 AC006504.8-201ENST00000621046 635 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.35□□□□□ -2.47
COL6A3P12111 AL953862.1-201ENST00000423016 168 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 MTND1P14-201ENST00000427400 950 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 MTND3P5-201ENST00000512798 333 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 MTCO3P27-201ENST00000514397 196 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 RNU6-885P-201ENST00000516607 104 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms