Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 U4atac.1-201ENST00000618345 95 ntBASIC1.99□□□□□ -2.09
CLPTM1O96005 MIR1248-201ENST00000629190 106 ntBASIC1.99□□□□□ -2.09
CLPTM1O96005 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.99□□□□□ -2.09
CLPTM1O96005 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CLPTM1O96005 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.98□□□□□ -2.09
CLPTM1O96005 Y_RNA.27-201ENST00000362540 103 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 RNU1-76P-201ENST00000362903 159 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 RNU6-234P-201ENST00000365229 104 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 RNU6-546P-201ENST00000383991 107 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 Y_RNA.415-201ENST00000384012 112 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 RNU6-245P-201ENST00000384020 107 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 RNY3P4-201ENST00000384428 101 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 MIR329-1-201ENST00000385028 80 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 MIR320B2-201ENST00000408479 138 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 SNORD12B-201ENST00000410433 91 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 MTCO3P19-201ENST00000415864 321 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 CBX3P6-201ENST00000430257 527 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 RNU6-764P-201ENST00000516396 105 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 MIR2355-201ENST00000517199 87 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 AC022616.8-201ENST00000533569 253 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 AC091544.4-201ENST00000555268 342 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 AC116312.1-201ENST00000606841 314 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.98□□□□□ -2.09
CLPTM1O96005 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.98□□□□□ -2.09
CLPTM1O96005 AC010999.1-201ENST00000611856 324 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 AL590808.1-201ENST00000618696 141 ntBASIC1.98□□□□□ -2.09
CLPTM1O96005 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLPTM1O96005 MTND5P35-201ENST00000557537 1720 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLPTM1O96005 Y_RNA.153-201ENST00000363615 91 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 Y_RNA.179-201ENST00000363844 90 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 RNU6-793P-201ENST00000384233 104 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 SNORA48.3-201ENST00000391081 134 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 AL033519.2-201ENST00000403958 392 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 AL512604.1-201ENST00000404812 257 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 RNU6-985P-201ENST00000410182 104 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 RNA5SP504-201ENST00000410676 117 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.97□□□□□ -2.09
CLPTM1O96005 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.97□□□□□ -2.09
CLPTM1O96005 AC018634.1-201ENST00000437554 401 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 AC009237.7-201ENST00000447357 229 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 RNU7-14P-201ENST00000459331 62 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 MTATP8P1-201ENST00000467115 207 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 AC018868.1-201ENST00000491307 315 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 RNU6-397P-201ENST00000516226 104 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 RNU6-1046P-201ENST00000516538 107 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 Y_RNA.715-201ENST00000517082 110 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 RRN3P3-201ENST00000549207 578 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.97□□□□□ -2.09
CLPTM1O96005 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.97□□□□□ -2.09
CLPTM1O96005 AC008737.2-201ENST00000599446 118 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 RPS29P30-201ENST00000600975 111 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 AL390123.1-201ENST00000603216 237 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.97□□□□□ -2.09
CLPTM1O96005 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLPTM1O96005 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
CLPTM1O96005 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CLPTM1O96005 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CLPTM1O96005 RNU6-545P-201ENST00000362681 104 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 RNU4-50P-201ENST00000364361 141 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 RNU1-91P-201ENST00000364746 163 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 SNORD87-201ENST00000364849 89 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 SNORD78.2-201ENST00000391076 69 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 RNU2-48P-201ENST00000410694 191 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.96□□□□□ -2.1
CLPTM1O96005 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.96□□□□□ -2.1
CLPTM1O96005 U8.20-201ENST00000459445 131 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 RPS23P5-201ENST00000495419 428 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 Y_RNA.683-201ENST00000516508 93 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 RN7SKP49-201ENST00000516675 260 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 Y_RNA.720-201ENST00000517166 92 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 RNU6-667P-201ENST00000517186 102 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 AC022616.4-201ENST00000522985 181 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.96□□□□□ -2.1
CLPTM1O96005 AC005034.5-201ENST00000604219 466 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 AC012493.3-201ENST00000604494 112 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 RAC1P9-201ENST00000604990 392 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 PART1_1.1-201ENST00000611761 217 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 AC064859.1-201ENST00000624741 174 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 AL078596.1-201ENST00000624856 447 ntBASIC1.96□□□□□ -2.1
CLPTM1O96005 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CLPTM1O96005 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.96□□□□□ -2.1
CLPTM1O96005 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CLPTM1O96005 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CLPTM1O96005 RNU1-62P-201ENST00000362599 164 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 Y_RNA.145-201ENST00000363527 102 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 SNORA25B-201ENST00000365507 128 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 RNU6-1145P-201ENST00000384246 107 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 Y_RNA.459-201ENST00000384251 102 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 Y_RNA.471-201ENST00000384312 102 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 RNU6-130P-201ENST00000411112 103 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 Z98742.3-201ENST00000418637 326 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 DPH3P2-201ENST00000422618 250 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 SDAD1P3-201ENST00000427380 333 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.95□□□□□ -2.1
CLPTM1O96005 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.95□□□□□ -2.1
CLPTM1O96005 TRBV12-1-201ENST00000479785 344 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 AC093852.1-201ENST00000503587 266 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 SNORA40.9-201ENST00000515895 93 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms