Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
NPM3O75607 Y_RNA.57-201ENST00000362806 113 ntBASIC5.7□□□□□ -1.5
NPM3O75607 SNORA24-201ENST00000384096 131 ntBASIC5.7□□□□□ -1.5
NPM3O75607 RNA5SP109-201ENST00000391010 116 ntBASIC5.7□□□□□ -1.5
NPM3O75607 SNORA11.4-201ENST00000408823 129 ntBASIC5.7□□□□□ -1.5
NPM3O75607 RPL18P10-201ENST00000425606 538 ntBASIC5.7□□□□□ -1.5
NPM3O75607 RN7SL354P-201ENST00000469282 294 ntBASIC5.7□□□□□ -1.5
NPM3O75607 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.7□□□□□ -1.5
NPM3O75607 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.7□□□□□ -1.5
NPM3O75607 PLD1-217ENST00000627725 174 ntTSL 5 BASIC5.7□□□□□ -1.5
NPM3O75607 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.7□□□□□ -1.5
NPM3O75607 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPM3O75607 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC5.7□□□□□ -1.5
NPM3O75607 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPM3O75607 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPM3O75607 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC5.7□□□□□ -1.5
NPM3O75607 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPM3O75607 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.7□□□□□ -1.5
NPM3O75607 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPM3O75607 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NPM3O75607 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.69□□□□□ -1.5
NPM3O75607 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.69□□□□□ -1.5
NPM3O75607 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NPM3O75607 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NPM3O75607 SNORA62-201ENST00000365493 153 ntBASIC5.69□□□□□ -1.5
NPM3O75607 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC5.69□□□□□ -1.5
NPM3O75607 MIR4715-201ENST00000584117 79 ntBASIC5.69□□□□□ -1.5
NPM3O75607 AC091152.2-201ENST00000591628 2569 ntBASIC5.69□□□□□ -1.5
NPM3O75607 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPM3O75607 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPM3O75607 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NPM3O75607 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPM3O75607 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NPM3O75607 AC004656.1-201ENST00000568479 4951 ntBASIC5.69□□□□□ -1.5
NPM3O75607 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPM3O75607 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.69□□□□□ -1.5
NPM3O75607 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
NPM3O75607 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPM3O75607 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPM3O75607 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
NPM3O75607 Y_RNA.173-201ENST00000363776 113 ntBASIC5.68□□□□□ -1.5
NPM3O75607 Y_RNA.340-201ENST00000365330 92 ntBASIC5.68□□□□□ -1.5
NPM3O75607 RNU6-447P-201ENST00000410293 104 ntBASIC5.68□□□□□ -1.5
NPM3O75607 RNU6-1118P-201ENST00000410382 104 ntBASIC5.68□□□□□ -1.5
NPM3O75607 RNU6-1076P-201ENST00000410397 104 ntBASIC5.68□□□□□ -1.5
NPM3O75607 RNU6-355P-201ENST00000410427 104 ntBASIC5.68□□□□□ -1.5
NPM3O75607 RNU6-791P-201ENST00000410467 104 ntBASIC5.68□□□□□ -1.5
NPM3O75607 RNU6-705P-201ENST00000410601 104 ntBASIC5.68□□□□□ -1.5
NPM3O75607 RNU6-1100P-201ENST00000410691 104 ntBASIC5.68□□□□□ -1.5
NPM3O75607 RNU6-860P-201ENST00000410860 104 ntBASIC5.68□□□□□ -1.5
NPM3O75607 RNU6-1217P-201ENST00000411276 104 ntBASIC5.68□□□□□ -1.5
NPM3O75607 RNU6-785P-201ENST00000411324 104 ntBASIC5.68□□□□□ -1.5
NPM3O75607 RNU6-709P-201ENST00000517257 104 ntBASIC5.68□□□□□ -1.5
NPM3O75607 MIR4697-201ENST00000582977 78 ntBASIC5.68□□□□□ -1.5
NPM3O75607 U6.90-201ENST00000614007 104 ntBASIC5.68□□□□□ -1.5
NPM3O75607 U6.70-201ENST00000620287 104 ntBASIC5.68□□□□□ -1.5
NPM3O75607 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NPM3O75607 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPM3O75607 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPM3O75607 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.68□□□□□ -1.5
NPM3O75607 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPM3O75607 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPM3O75607 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.67□□□□□ -1.5
NPM3O75607 RNU6-478P-201ENST00000363904 110 ntBASIC5.67□□□□□ -1.5
NPM3O75607 Y_RNA.448-201ENST00000384185 108 ntBASIC5.67□□□□□ -1.5
NPM3O75607 MIR181B2-201ENST00000385004 89 ntBASIC5.67□□□□□ -1.5
NPM3O75607 RNU6-1307P-201ENST00000391012 103 ntBASIC5.67□□□□□ -1.5
NPM3O75607 AC091390.1-201ENST00000433904 331 ntBASIC5.67□□□□□ -1.5
NPM3O75607 RNU7-35P-201ENST00000517174 62 ntBASIC5.67□□□□□ -1.5
NPM3O75607 RNU6-711P-201ENST00000517255 106 ntBASIC5.67□□□□□ -1.5
NPM3O75607 MTND5P40-201ENST00000559945 246 ntBASIC5.67□□□□□ -1.5
NPM3O75607 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.67□□□□□ -1.5
NPM3O75607 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPM3O75607 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPM3O75607 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPM3O75607 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
NPM3O75607 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
NPM3O75607 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NPM3O75607 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
NPM3O75607 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
NPM3O75607 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPM3O75607 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.66□□□□□ -1.5
NPM3O75607 RNU6-1190P-201ENST00000410811 104 ntBASIC5.66□□□□□ -1.5
NPM3O75607 AC034105.4-201ENST00000568304 277 ntBASIC5.66□□□□□ -1.5
NPM3O75607 MIR4474-201ENST00000579189 78 ntBASIC5.66□□□□□ -1.5
NPM3O75607 AC012676.2-201ENST00000619258 186 ntBASIC5.66□□□□□ -1.5
NPM3O75607 OR14L1P-202ENST00000641545 3009 ntBASIC5.66□□□□□ -1.5
NPM3O75607 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC5.66□□□□□ -1.5
NPM3O75607 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPM3O75607 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
NPM3O75607 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC5.65□□□□□ -1.5
NPM3O75607 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NPM3O75607 RNA5SP138-201ENST00000365098 114 ntBASIC5.65□□□□□ -1.5
NPM3O75607 RNU6-411P-201ENST00000384451 107 ntBASIC5.65□□□□□ -1.5
NPM3O75607 AC245047.7-201ENST00000440265 293 ntBASIC5.65□□□□□ -1.5
NPM3O75607 RN7SL385P-201ENST00000468873 276 ntBASIC5.65□□□□□ -1.5
NPM3O75607 SEM1P1-201ENST00000506694 209 ntBASIC5.65□□□□□ -1.5
NPM3O75607 CEP170P1-201ENST00000502249 4587 ntBASIC5.65□□□□□ -1.51
NPM3O75607 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
NPM3O75607 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms