Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AL672296.1-201ENST00000427780 2158 ntBASIC4.3□□□□□ -1.72
ACTN4O43707 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
ACTN4O43707 MAPK10-372ENST00000641954 3413 ntBASIC4.3□□□□□ -1.72
ACTN4O43707 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ACTN4O43707 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ACTN4O43707 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ACTN4O43707 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.29□□□□□ -1.72
ACTN4O43707 RNU6-888P-201ENST00000363010 101 ntBASIC4.29□□□□□ -1.72
ACTN4O43707 Y_RNA.93-201ENST00000363066 109 ntBASIC4.29□□□□□ -1.72
ACTN4O43707 RNY1P10-201ENST00000363268 113 ntBASIC4.29□□□□□ -1.72
ACTN4O43707 Y_RNA.342-201ENST00000365352 113 ntBASIC4.29□□□□□ -1.72
ACTN4O43707 SNORA70C-201ENST00000384538 135 ntBASIC4.29□□□□□ -1.72
ACTN4O43707 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ACTN4O43707 RPS26P8-201ENST00000393490 348 ntBASIC4.29□□□□□ -1.72
ACTN4O43707 AC092017.2-201ENST00000427600 362 ntBASIC4.29□□□□□ -1.72
ACTN4O43707 RNU7-23P-201ENST00000459465 62 ntBASIC4.29□□□□□ -1.72
ACTN4O43707 AC097462.1-201ENST00000514125 324 ntBASIC4.29□□□□□ -1.72
ACTN4O43707 RNY4P20-201ENST00000516678 93 ntBASIC4.29□□□□□ -1.72
ACTN4O43707 AC109329.2-201ENST00000519658 482 ntBASIC4.29□□□□□ -1.72
ACTN4O43707 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.29□□□□□ -1.72
ACTN4O43707 AC084364.2-201ENST00000546924 395 ntBASIC4.29□□□□□ -1.72
ACTN4O43707 MIR4438-201ENST00000585271 93 ntBASIC4.29□□□□□ -1.72
ACTN4O43707 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.29□□□□□ -1.72
ACTN4O43707 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ACTN4O43707 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
ACTN4O43707 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ACTN4O43707 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.29□□□□□ -1.72
ACTN4O43707 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.29□□□□□ -1.72
ACTN4O43707 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
ACTN4O43707 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.28□□□□□ -1.72
ACTN4O43707 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ACTN4O43707 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ACTN4O43707 MIR372-201ENST00000362225 67 ntBASIC4.28□□□□□ -1.72
ACTN4O43707 SNORD24-201ENST00000383884 75 ntBASIC4.28□□□□□ -1.72
ACTN4O43707 RNU1-13P-201ENST00000384499 162 ntBASIC4.28□□□□□ -1.72
ACTN4O43707 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ACTN4O43707 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.28□□□□□ -1.72
ACTN4O43707 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.28□□□□□ -1.72
ACTN4O43707 SCARNA14-201ENST00000516903 136 ntBASIC4.28□□□□□ -1.72
ACTN4O43707 MIR6076-201ENST00000617521 113 ntBASIC4.28□□□□□ -1.72
ACTN4O43707 MIR6500-201ENST00000622700 86 ntBASIC4.28□□□□□ -1.72
ACTN4O43707 AC009487.4-201ENST00000624969 3585 ntBASIC4.28□□□□□ -1.72
ACTN4O43707 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ACTN4O43707 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.27□□□□□ -1.73
ACTN4O43707 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ACTN4O43707 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
ACTN4O43707 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
ACTN4O43707 Y_RNA.107-201ENST00000363190 121 ntBASIC4.27□□□□□ -1.73
ACTN4O43707 SNORA63D-201ENST00000364359 132 ntBASIC4.27□□□□□ -1.73
ACTN4O43707 SNORD31B-201ENST00000364977 69 ntBASIC4.27□□□□□ -1.73
ACTN4O43707 RNU6-234P-201ENST00000365229 104 ntBASIC4.27□□□□□ -1.73
ACTN4O43707 RNU6-418P-201ENST00000384035 107 ntBASIC4.27□□□□□ -1.73
ACTN4O43707 RNU6-1235P-201ENST00000384559 107 ntBASIC4.27□□□□□ -1.73
ACTN4O43707 SNORD77.3-201ENST00000391113 65 ntBASIC4.27□□□□□ -1.73
ACTN4O43707 Y_RNA.621-201ENST00000411065 96 ntBASIC4.27□□□□□ -1.73
ACTN4O43707 RNU6-498P-201ENST00000459468 107 ntBASIC4.27□□□□□ -1.73
ACTN4O43707 RPL30P14-201ENST00000482744 348 ntBASIC4.27□□□□□ -1.73
ACTN4O43707 NDUFA4P2-201ENST00000489989 244 ntBASIC4.27□□□□□ -1.73
ACTN4O43707 RPL21P129-201ENST00000491732 478 ntBASIC4.27□□□□□ -1.73
ACTN4O43707 RNU6-830P-201ENST00000516353 107 ntBASIC4.27□□□□□ -1.73
ACTN4O43707 SNORA62.6-201ENST00000606322 83 ntBASIC4.27□□□□□ -1.73
ACTN4O43707 uc_338.14-201ENST00000613162 166 ntBASIC4.27□□□□□ -1.73
ACTN4O43707 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ACTN4O43707 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ACTN4O43707 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ACTN4O43707 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.27□□□□□ -1.73
ACTN4O43707 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ACTN4O43707 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.26□□□□□ -1.73
ACTN4O43707 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ACTN4O43707 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ACTN4O43707 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ACTN4O43707 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ACTN4O43707 RNU6-1124P-201ENST00000384169 107 ntBASIC4.26□□□□□ -1.73
ACTN4O43707 RNU6-198P-201ENST00000384258 104 ntBASIC4.26□□□□□ -1.73
ACTN4O43707 RNA5SP225-201ENST00000410874 135 ntBASIC4.26□□□□□ -1.73
ACTN4O43707 AC016909.1-201ENST00000415916 166 ntBASIC4.26□□□□□ -1.73
ACTN4O43707 AL513477.1-202ENST00000417061 214 ntBASIC4.26□□□□□ -1.73
ACTN4O43707 EIF4EP4-201ENST00000424916 578 ntBASIC4.26□□□□□ -1.73
ACTN4O43707 RPS26P48-201ENST00000491713 339 ntBASIC4.26□□□□□ -1.73
ACTN4O43707 RNU1-61P-201ENST00000516107 151 ntBASIC4.26□□□□□ -1.73
ACTN4O43707 RNU6-693P-201ENST00000516134 107 ntBASIC4.26□□□□□ -1.73
ACTN4O43707 AC074050.1-201ENST00000563247 211 ntBASIC4.26□□□□□ -1.73
ACTN4O43707 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.26□□□□□ -1.73
ACTN4O43707 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ACTN4O43707 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.26□□□□□ -1.73
ACTN4O43707 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ACTN4O43707 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
ACTN4O43707 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.25□□□□□ -1.73
ACTN4O43707 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.25□□□□□ -1.73
ACTN4O43707 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ACTN4O43707 RNU6-228P-201ENST00000362700 106 ntBASIC4.25□□□□□ -1.73
ACTN4O43707 Y_RNA.265-201ENST00000364677 108 ntBASIC4.25□□□□□ -1.73
ACTN4O43707 AC097463.2-201ENST00000421074 142 ntBASIC4.25□□□□□ -1.73
ACTN4O43707 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.25□□□□□ -1.73
ACTN4O43707 AL445687.1-201ENST00000439946 251 ntBASIC4.25□□□□□ -1.73
ACTN4O43707 AC010099.1-201ENST00000455434 375 ntBASIC4.25□□□□□ -1.73
ACTN4O43707 Y_RNA.666-201ENST00000516187 112 ntBASIC4.25□□□□□ -1.73
ACTN4O43707 RN7SKP209-201ENST00000516888 304 ntBASIC4.25□□□□□ -1.73
ACTN4O43707 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.25□□□□□ -1.73
ACTN4O43707 AP000867.2-201ENST00000532468 320 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms