Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
MSI1O43347 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.4□□□□□ -2.03
MSI1O43347 MTND5P6-201ENST00000422338 1798 ntBASIC2.39□□□□□ -2.03
MSI1O43347 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
MSI1O43347 RNU6-238P-201ENST00000363313 106 ntBASIC2.39□□□□□ -2.03
MSI1O43347 Y_RNA.152-201ENST00000363578 100 ntBASIC2.39□□□□□ -2.03
MSI1O43347 Y_RNA.183-201ENST00000363882 113 ntBASIC2.39□□□□□ -2.03
MSI1O43347 RNU6-961P-201ENST00000363893 105 ntBASIC2.39□□□□□ -2.03
MSI1O43347 RNU6-1180P-201ENST00000364935 107 ntBASIC2.39□□□□□ -2.03
MSI1O43347 Y_RNA.439-201ENST00000384119 94 ntBASIC2.39□□□□□ -2.03
MSI1O43347 AL033519.2-201ENST00000403958 392 ntBASIC2.39□□□□□ -2.03
MSI1O43347 Y_RNA.595-201ENST00000410403 105 ntBASIC2.39□□□□□ -2.03
MSI1O43347 RNU2-48P-201ENST00000410694 191 ntBASIC2.39□□□□□ -2.03
MSI1O43347 RNU2-63P-201ENST00000410792 194 ntBASIC2.39□□□□□ -2.03
MSI1O43347 RNU2-32P-201ENST00000411193 191 ntBASIC2.39□□□□□ -2.03
MSI1O43347 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.39□□□□□ -2.03
MSI1O43347 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
MSI1O43347 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.39□□□□□ -2.03
MSI1O43347 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.39□□□□□ -2.03
MSI1O43347 AC108210.2-201ENST00000503681 201 ntBASIC2.39□□□□□ -2.03
MSI1O43347 ATP5EP1-201ENST00000510257 156 ntBASIC2.39□□□□□ -2.03
MSI1O43347 RN7SKP40-201ENST00000517211 242 ntBASIC2.39□□□□□ -2.03
MSI1O43347 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.39□□□□□ -2.03
MSI1O43347 RPL17P51-201ENST00000605218 238 ntBASIC2.39□□□□□ -2.03
MSI1O43347 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.39□□□□□ -2.03
MSI1O43347 Z82209.1-201ENST00000422141 2135 ntBASIC2.39□□□□□ -2.03
MSI1O43347 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
MSI1O43347 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.38□□□□□ -2.03
MSI1O43347 Y_RNA.149-201ENST00000363558 117 ntBASIC2.38□□□□□ -2.03
MSI1O43347 RNU6-770P-201ENST00000363929 105 ntBASIC2.38□□□□□ -2.03
MSI1O43347 Y_RNA.222-201ENST00000364264 102 ntBASIC2.38□□□□□ -2.03
MSI1O43347 SNORD87-201ENST00000364849 89 ntBASIC2.38□□□□□ -2.03
MSI1O43347 RNU6-234P-201ENST00000365229 104 ntBASIC2.38□□□□□ -2.03
MSI1O43347 RNA5SP240-201ENST00000365355 128 ntBASIC2.38□□□□□ -2.03
MSI1O43347 RNU6-574P-201ENST00000384265 107 ntBASIC2.38□□□□□ -2.03
MSI1O43347 ELOCP21-201ENST00000412558 336 ntBASIC2.38□□□□□ -2.03
MSI1O43347 AL603825.1-201ENST00000438481 80 ntBASIC2.38□□□□□ -2.03
MSI1O43347 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.38□□□□□ -2.03
MSI1O43347 PCNPP5-201ENST00000452246 481 ntBASIC2.38□□□□□ -2.03
MSI1O43347 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.38□□□□□ -2.03
MSI1O43347 LINC01399-202ENST00000458450 244 ntBASIC2.38□□□□□ -2.03
MSI1O43347 AC018868.1-201ENST00000491307 315 ntBASIC2.38□□□□□ -2.03
MSI1O43347 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.38□□□□□ -2.03
MSI1O43347 RNU6-408P-201ENST00000515910 100 ntBASIC2.38□□□□□ -2.03
MSI1O43347 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.38□□□□□ -2.03
MSI1O43347 RNU5F-4P-201ENST00000516581 114 ntBASIC2.38□□□□□ -2.03
MSI1O43347 RNU1-117P-201ENST00000517041 158 ntBASIC2.38□□□□□ -2.03
MSI1O43347 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.38□□□□□ -2.03
MSI1O43347 AC022616.8-201ENST00000533569 253 ntBASIC2.38□□□□□ -2.03
MSI1O43347 AC233702.2-202ENST00000562547 291 ntBASIC2.38□□□□□ -2.03
MSI1O43347 MIR5007-201ENST00000583098 95 ntBASIC2.38□□□□□ -2.03
MSI1O43347 Y_RNA.772-201ENST00000606692 102 ntBASIC2.38□□□□□ -2.03
MSI1O43347 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.38□□□□□ -2.03
MSI1O43347 AC130454.1-201ENST00000622948 401 ntBASIC2.38□□□□□ -2.03
MSI1O43347 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.38□□□□□ -2.03
MSI1O43347 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
MSI1O43347 Y_RNA.19-201ENST00000362462 99 ntBASIC2.37□□□□□ -2.03
MSI1O43347 Y_RNA.64-201ENST00000362845 102 ntBASIC2.37□□□□□ -2.03
MSI1O43347 Y_RNA.176-201ENST00000363815 109 ntBASIC2.37□□□□□ -2.03
MSI1O43347 RNU6-546P-201ENST00000383991 107 ntBASIC2.37□□□□□ -2.03
MSI1O43347 Z98742.3-201ENST00000418637 326 ntBASIC2.37□□□□□ -2.03
MSI1O43347 AL731563.1-201ENST00000442202 214 ntBASIC2.37□□□□□ -2.03
MSI1O43347 DYNLT3P2-201ENST00000442517 295 ntBASIC2.37□□□□□ -2.03
MSI1O43347 UQCRBP2-201ENST00000447827 297 ntBASIC2.37□□□□□ -2.03
MSI1O43347 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.37□□□□□ -2.03
MSI1O43347 RPS23P5-201ENST00000495419 428 ntBASIC2.37□□□□□ -2.03
MSI1O43347 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.37□□□□□ -2.03
MSI1O43347 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.37□□□□□ -2.03
MSI1O43347 AC025465.3-201ENST00000510570 311 ntBASIC2.37□□□□□ -2.03
MSI1O43347 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.37□□□□□ -2.03
MSI1O43347 RNY3P15-201ENST00000516297 97 ntBASIC2.37□□□□□ -2.03
MSI1O43347 SNORA40.15-201ENST00000516884 107 ntBASIC2.37□□□□□ -2.03
MSI1O43347 AC015712.3-201ENST00000559380 164 ntBASIC2.37□□□□□ -2.03
MSI1O43347 MYL12BP1-201ENST00000569826 507 ntBASIC2.37□□□□□ -2.03
MSI1O43347 AL355297.2-201ENST00000604792 129 ntBASIC2.37□□□□□ -2.03
MSI1O43347 SNORD11B-201ENST00000607707 90 ntBASIC2.37□□□□□ -2.03
MSI1O43347 AC008873.1-201ENST00000625051 138 ntBASIC2.37□□□□□ -2.03
MSI1O43347 AC068205.3-201ENST00000636385 468 ntBASIC2.37□□□□□ -2.03
MSI1O43347 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
MSI1O43347 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
MSI1O43347 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.36□□□□□ -2.03
MSI1O43347 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MSI1O43347 Y_RNA.143-201ENST00000363520 106 ntBASIC2.36□□□□□ -2.03
MSI1O43347 RNU1-91P-201ENST00000364746 163 ntBASIC2.36□□□□□ -2.03
MSI1O43347 RNU6-463P-201ENST00000384340 107 ntBASIC2.36□□□□□ -2.03
MSI1O43347 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
MSI1O43347 RNU2-20P-201ENST00000410425 191 ntBASIC2.36□□□□□ -2.03
MSI1O43347 RPL21P38-201ENST00000418090 167 ntBASIC2.36□□□□□ -2.03
MSI1O43347 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.36□□□□□ -2.03
MSI1O43347 AC005002.2-201ENST00000438228 269 ntBASIC2.36□□□□□ -2.03
MSI1O43347 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.36□□□□□ -2.03
MSI1O43347 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.36□□□□□ -2.03
MSI1O43347 RNU6-548P-201ENST00000517083 115 ntBASIC2.36□□□□□ -2.03
MSI1O43347 IGLV3-17-201ENST00000519099 244 ntBASIC2.36□□□□□ -2.03
MSI1O43347 CYCSP23-201ENST00000519781 313 ntBASIC2.36□□□□□ -2.03
MSI1O43347 AP002001.1-203ENST00000534002 267 ntBASIC2.36□□□□□ -2.03
MSI1O43347 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.36□□□□□ -2.03
MSI1O43347 AC018448.1-201ENST00000552843 316 ntBASIC2.36□□□□□ -2.03
MSI1O43347 AC055872.1-201ENST00000570978 278 ntBASIC2.36□□□□□ -2.03
MSI1O43347 MIR4423-201ENST00000580922 80 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms