Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 AC004584.2-201ENST00000570407 410 ntBASIC0.97□□□□□ -2.25
SMCO2A6NFE2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.97□□□□□ -2.25
SMCO2A6NFE2 FAM106DP-201ENST00000586416 501 ntBASIC0.97□□□□□ -2.25
SMCO2A6NFE2 AL022345.2-201ENST00000606307 135 ntBASIC0.97□□□□□ -2.25
SMCO2A6NFE2 AL359075.3-201ENST00000613288 217 ntBASIC0.97□□□□□ -2.25
SMCO2A6NFE2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.97□□□□□ -2.25
SMCO2A6NFE2 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.97□□□□□ -2.25
SMCO2A6NFE2 CALM2P3-201ENST00000400429 449 ntBASIC0.96□□□□□ -2.26
SMCO2A6NFE2 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.96□□□□□ -2.26
SMCO2A6NFE2 MRPS10P2-201ENST00000431226 381 ntBASIC0.96□□□□□ -2.26
SMCO2A6NFE2 TPT1P7-201ENST00000458300 517 ntBASIC0.96□□□□□ -2.26
SMCO2A6NFE2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.96□□□□□ -2.26
SMCO2A6NFE2 AK6P2-201ENST00000549020 471 ntBASIC0.96□□□□□ -2.26
SMCO2A6NFE2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.96□□□□□ -2.26
SMCO2A6NFE2 AC008088.1-201ENST00000580993 280 ntBASIC0.96□□□□□ -2.26
SMCO2A6NFE2 AC146944.4-201ENST00000602697 718 ntBASIC0.96□□□□□ -2.26
SMCO2A6NFE2 AC211469.2-201ENST00000605461 205 ntBASIC0.96□□□□□ -2.26
SMCO2A6NFE2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.96□□□□□ -2.26
SMCO2A6NFE2 AC073534.2-201ENST00000620377 381 ntBASIC0.96□□□□□ -2.26
SMCO2A6NFE2 MIR8054-201ENST00000620877 86 ntBASIC0.96□□□□□ -2.26
SMCO2A6NFE2 ZNF204P-201ENST00000416749 2397 ntBASIC0.96□□□□□ -2.26
SMCO2A6NFE2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SMCO2A6NFE2 Y_RNA.77-201ENST00000362962 107 ntBASIC0.95□□□□□ -2.26
SMCO2A6NFE2 SNORD115-32-201ENST00000364079 82 ntBASIC0.95□□□□□ -2.26
SMCO2A6NFE2 Y_RNA.481-201ENST00000384373 102 ntBASIC0.95□□□□□ -2.26
SMCO2A6NFE2 MIR19B1-201ENST00000384829 87 ntBASIC0.95□□□□□ -2.26
SMCO2A6NFE2 RNU11-5P-201ENST00000391216 129 ntBASIC0.95□□□□□ -2.26
SMCO2A6NFE2 RAB28P5-201ENST00000427490 651 ntBASIC0.95□□□□□ -2.26
SMCO2A6NFE2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.95□□□□□ -2.26
SMCO2A6NFE2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.95□□□□□ -2.26
SMCO2A6NFE2 RNU1-142P-201ENST00000516682 145 ntBASIC0.95□□□□□ -2.26
SMCO2A6NFE2 CYCSP23-201ENST00000519781 313 ntBASIC0.95□□□□□ -2.26
SMCO2A6NFE2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.95□□□□□ -2.26
SMCO2A6NFE2 AC007834.2-201ENST00000536310 343 ntBASIC0.95□□□□□ -2.26
SMCO2A6NFE2 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.95□□□□□ -2.26
SMCO2A6NFE2 MIR5695-201ENST00000579717 85 ntBASIC0.95□□□□□ -2.26
SMCO2A6NFE2 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.95□□□□□ -2.26
SMCO2A6NFE2 AC119751.7-201ENST00000600494 245 ntBASIC0.95□□□□□ -2.26
SMCO2A6NFE2 SNORD11B-201ENST00000607707 90 ntBASIC0.95□□□□□ -2.26
SMCO2A6NFE2 AC063944.3-201ENST00000609969 533 ntBASIC0.95□□□□□ -2.26
SMCO2A6NFE2 AC012676.2-201ENST00000619258 186 ntBASIC0.95□□□□□ -2.26
SMCO2A6NFE2 RNU6-137P-201ENST00000363680 108 ntBASIC0.94□□□□□ -2.26
SMCO2A6NFE2 Y_RNA.226-201ENST00000364337 114 ntBASIC0.94□□□□□ -2.26
SMCO2A6NFE2 MIR521-1-201ENST00000384902 87 ntBASIC0.94□□□□□ -2.26
SMCO2A6NFE2 MIR1185-2-201ENST00000408687 86 ntBASIC0.94□□□□□ -2.26
SMCO2A6NFE2 RN7SKP200-201ENST00000410564 320 ntBASIC0.94□□□□□ -2.26
SMCO2A6NFE2 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.94□□□□□ -2.26
SMCO2A6NFE2 UBL5P1-201ENST00000507979 193 ntBASIC0.94□□□□□ -2.26
SMCO2A6NFE2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.94□□□□□ -2.26
SMCO2A6NFE2 AC016957.1-201ENST00000534895 309 ntBASIC0.94□□□□□ -2.26
SMCO2A6NFE2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.94□□□□□ -2.26
SMCO2A6NFE2 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.94□□□□□ -2.26
SMCO2A6NFE2 U6.73-201ENST00000619194 103 ntBASIC0.94□□□□□ -2.26
SMCO2A6NFE2 AC068792.1-201ENST00000621354 417 ntBASIC0.94□□□□□ -2.26
SMCO2A6NFE2 AL513423.1-201ENST00000621695 132 ntBASIC0.94□□□□□ -2.26
SMCO2A6NFE2 SNORD114-2-201ENST00000363953 78 ntBASIC0.93□□□□□ -2.26
SMCO2A6NFE2 RNU6-128P-201ENST00000383976 107 ntBASIC0.93□□□□□ -2.26
SMCO2A6NFE2 SNORD37.1-201ENST00000390968 65 ntBASIC0.93□□□□□ -2.26
SMCO2A6NFE2 DEFB108C-201ENST00000400154 252 ntBASIC0.93□□□□□ -2.26
SMCO2A6NFE2 RNU6-1054P-201ENST00000411293 104 ntBASIC0.93□□□□□ -2.26
SMCO2A6NFE2 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.93□□□□□ -2.26
SMCO2A6NFE2 RPS29P1-201ENST00000465274 159 ntBASIC0.93□□□□□ -2.26
SMCO2A6NFE2 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
SMCO2A6NFE2 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
SMCO2A6NFE2 OSBPL9P5-201ENST00000542581 171 ntBASIC0.93□□□□□ -2.26
SMCO2A6NFE2 AC022432.1-201ENST00000595739 310 ntBASIC0.93□□□□□ -2.26
SMCO2A6NFE2 AL513534.2-201ENST00000603836 250 ntBASIC0.93□□□□□ -2.26
SMCO2A6NFE2 AC018630.2-201ENST00000534866 2403 ntBASIC0.93□□□□□ -2.26
SMCO2A6NFE2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SMCO2A6NFE2 RNU6-254P-201ENST00000363377 107 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 U3.8-201ENST00000363675 217 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 Y_RNA.231-201ENST00000364358 102 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 MIR653-201ENST00000385279 96 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 MRPL42P3-201ENST00000401492 326 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.92□□□□□ -2.26
SMCO2A6NFE2 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.92□□□□□ -2.26
SMCO2A6NFE2 AC005002.2-201ENST00000438228 269 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 HSPE1P13-201ENST00000451143 297 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 AC092991.1-201ENST00000477176 376 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.92□□□□□ -2.26
SMCO2A6NFE2 RNU7-99P-201ENST00000516271 62 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 RNU6-1332P-201ENST00000516666 104 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 RNU6-1198P-201ENST00000516904 67 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 RNU1-117P-201ENST00000517041 158 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 RNU6-58P-201ENST00000517143 103 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.92□□□□□ -2.26
SMCO2A6NFE2 AL158211.1-201ENST00000566763 763 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 RNU6-89P-201ENST00000606519 100 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 AL020996.3-201ENST00000606617 222 ntBASIC0.92□□□□□ -2.26
SMCO2A6NFE2 RNU4-9P-201ENST00000364951 139 ntBASIC0.91□□□□□ -2.26
SMCO2A6NFE2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.91□□□□□ -2.26
SMCO2A6NFE2 RNU6-505P-201ENST00000384427 107 ntBASIC0.91□□□□□ -2.26
SMCO2A6NFE2 RNU6-440P-201ENST00000390882 105 ntBASIC0.91□□□□□ -2.26
SMCO2A6NFE2 MIR1287-201ENST00000408492 90 ntBASIC0.91□□□□□ -2.26
SMCO2A6NFE2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.91□□□□□ -2.26
SMCO2A6NFE2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.91□□□□□ -2.26
SMCO2A6NFE2 AC010424.1-201ENST00000506336 297 ntBASIC0.91□□□□□ -2.26
SMCO2A6NFE2 AC103851.1-201ENST00000506833 274 ntBASIC0.91□□□□□ -2.26
SMCO2A6NFE2 RN7SKP49-201ENST00000516675 260 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms