Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.11□□□□□ -2.39
TCRBV4S1A1TA0A5B7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.11□□□□□ -2.39
TCRBV4S1A1TA0A5B7 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.11□□□□□ -2.39
TCRBV4S1A1TA0A5B7 RNA5SP454-201ENST00000517231 127 ntBASIC0.11□□□□□ -2.39
TCRBV4S1A1TA0A5B7 PCMTD1P2-201ENST00000565017 355 ntBASIC0.11□□□□□ -2.39
TCRBV4S1A1TA0A5B7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.11□□□□□ -2.39
TCRBV4S1A1TA0A5B7 RSL24D1P11-201ENST00000591045 491 ntBASIC0.11□□□□□ -2.39
TCRBV4S1A1TA0A5B7 SNORA28-201ENST00000606769 126 ntBASIC0.11□□□□□ -2.39
TCRBV4S1A1TA0A5B7 SEPT14P17-201ENST00000617978 177 ntBASIC0.11□□□□□ -2.39
TCRBV4S1A1TA0A5B7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.11□□□□□ -2.39
TCRBV4S1A1TA0A5B7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
TCRBV4S1A1TA0A5B7 AC090625.1-201ENST00000357130 210 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 Y_RNA.476-201ENST00000384347 108 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 RNU6-434P-201ENST00000384376 107 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 RNU6-1127P-201ENST00000384580 107 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 MTCO1P19-201ENST00000443487 500 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 EPS15P1-201ENST00000448836 336 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 RPS29P27-201ENST00000463711 170 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 AC010493.1-201ENST00000513479 292 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 SNORD27.1-201ENST00000516319 72 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 AP003716.2-201ENST00000528260 108 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 MTCO3P23-201ENST00000561363 289 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 AL117336.2-201ENST00000602435 335 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 RNU6-94P-201ENST00000607728 107 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 AC122133.1-201ENST00000613964 233 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 AC027807.2-201ENST00000616099 408 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 AC068792.1-201ENST00000621354 417 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 AL049777.1-201ENST00000622740 518 ntBASIC0.1□□□□□ -2.39
TCRBV4S1A1TA0A5B7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6-1029P-201ENST00000384109 107 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6-74P-201ENST00000384235 107 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR526A1-201ENST00000384897 85 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR140-201ENST00000385282 100 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR454-201ENST00000390180 115 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AL663109.1-201ENST00000411498 844 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC004854.1-201ENST00000440356 349 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU7-94P-201ENST00000459576 63 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC007215.1-201ENST00000464893 276 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 CYCTP-201ENST00000504253 315 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6-410P-201ENST00000517006 107 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU2-46P-201ENST00000517038 113 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AP003327.1-201ENST00000529684 127 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR4999-201ENST00000585029 91 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC007014.2-201ENST00000615581 479 ntBASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.09□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR1185-1-201ENST00000408598 86 ntBASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNA5SP494-201ENST00000410653 129 ntBASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6-177P-201ENST00000411257 104 ntBASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RPS29P15-201ENST00000458329 171 ntBASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6-612P-201ENST00000516909 102 ntBASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU1-117P-201ENST00000517041 158 ntBASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC022878.1-201ENST00000530684 149 ntBASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 FRG2DP-202ENST00000566967 323 ntBASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR4431-201ENST00000579990 94 ntBASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 BNIP3P39-201ENST00000601077 554 ntBASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC025449.1-201ENST00000603896 529 ntBASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AL133173.2-201ENST00000614270 90 ntBASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR6718-201ENST00000616153 80 ntBASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 SCARNA4-201ENST00000629045 128 ntBASIC0.08□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR103A2-201ENST00000362154 78 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU5E-5P-201ENST00000365379 116 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6-906P-201ENST00000384700 70 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNA5SP299-201ENST00000391203 116 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AL512286.1-201ENST00000439244 400 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MTCO2P3-201ENST00000442543 421 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 USP9YP12-201ENST00000450481 570 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MTCO2P18-201ENST00000457151 658 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU7-182P-201ENST00000459009 62 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC105313.1-201ENST00000509121 353 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU7-12P-201ENST00000516030 62 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6-344P-201ENST00000516635 111 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU11-2P-201ENST00000516898 142 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 7SK.7-201ENST00000603504 247 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 SNRPGP20-201ENST00000604477 205 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6-85P-201ENST00000605989 107 ntBASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
TCRBV4S1A1TA0A5B7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIRLET7C-201ENST00000362160 84 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 MIR103A1-201ENST00000362165 78 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNU6-227P-201ENST00000362865 103 ntBASIC0.06□□□□□ -2.4
TCRBV4S1A1TA0A5B7 RNA5SP257-201ENST00000363023 116 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms