Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 KRT18P1-202ENST00000452408 1331 ntBASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 NUS1P1-201ENST00000446295 882 ntBASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN10AQ9Y5Y9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 GPR32P1-201ENST00000601788 811 ntBASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN10AQ9Y5Y9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 AL845331.1-201ENST00000424978 1190 ntBASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 AC104692.2-201ENST00000603054 253 ntBASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 AL390719.2-201ENST00000606993 987 ntBASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN10AQ9Y5Y9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SCN10AQ9Y5Y9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 LINC00265-3P-201ENST00000447588 903 ntBASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 SLC25A6P4-201ENST00000586535 553 ntBASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 AC009078.2-202ENST00000463353 338 ntBASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 AC074051.2-201ENST00000565115 352 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms