Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 MIR662-201ENST00000384847 95 ntBASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
PCDHAC2Q9Y5I4 AC093525.10-201ENST00000625130 1569 ntBASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 TSPY22P-201ENST00000427496 604 ntBASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 GRAMD4P1-201ENST00000435181 1110 ntBASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 RCC2P3-201ENST00000418112 1537 ntBASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHAC2Q9Y5I4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 CHCHD2P8-201ENST00000429873 447 ntBASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 TPSP2-201ENST00000561760 610 ntBASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHAC2Q9Y5I4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 EMBP1-201ENST00000458200 901 ntBASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 IFNL4P1-201ENST00000607083 540 ntBASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 KRT18P1-202ENST00000452408 1331 ntBASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PCDHAC2Q9Y5I4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 AL512353.2-201ENST00000448759 1962 ntBASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms