Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM17Q9Y577 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM17Q9Y577 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM17Q9Y577 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM17Q9Y577 MINOS1P3-201ENST00000457048 203 ntBASIC21.38■■□□□ 1.01
TRIM17Q9Y577 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM17Q9Y577 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM17Q9Y577 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.38■■□□□ 1.01
TRIM17Q9Y577 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.38■■□□□ 1.01
TRIM17Q9Y577 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
TRIM17Q9Y577 GPR32P1-201ENST00000601788 811 ntBASIC21.38■■□□□ 1.01
TRIM17Q9Y577 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM17Q9Y577 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.38■■□□□ 1.01
TRIM17Q9Y577 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 MIR7706-201ENST00000613747 67 ntBASIC21.37■■□□□ 1.01
TRIM17Q9Y577 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIM17Q9Y577 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 AC098831.1-202ENST00000438821 336 ntBASIC21.36■■□□□ 1.01
TRIM17Q9Y577 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM17Q9Y577 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 RN7SL606P-201ENST00000472779 293 ntBASIC21.35■■□□□ 1.01
TRIM17Q9Y577 AC091607.1-201ENST00000490318 1060 ntBASIC21.35■■□□□ 1.01
TRIM17Q9Y577 PGAM5P1-201ENST00000518923 814 ntBASIC21.35■■□□□ 1.01
TRIM17Q9Y577 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM17Q9Y577 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TRIM17Q9Y577 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM17Q9Y577 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM17Q9Y577 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM17Q9Y577 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TRIM17Q9Y577 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
TRIM17Q9Y577 UPF3AP3-201ENST00000420996 769 ntBASIC21.34■■□□□ 1.01
TRIM17Q9Y577 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.34■■□□□ 1.01
TRIM17Q9Y577 RPS8P6-201ENST00000426177 609 ntBASIC21.34■■□□□ 1.01
TRIM17Q9Y577 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms