Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCKAP1Q9Y2A7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NCKAP1Q9Y2A7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCKAP1Q9Y2A7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCKAP1Q9Y2A7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.95■□□□□ 0.62
NCKAP1Q9Y2A7 GPAT2P1-201ENST00000444924 1672 ntBASIC18.95■□□□□ 0.62
NCKAP1Q9Y2A7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.95■□□□□ 0.62
NCKAP1Q9Y2A7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NCKAP1Q9Y2A7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 LINC01311-201ENST00000565162 1445 ntBASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 ZNF444P1-201ENST00000559497 298 ntBASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 AL136038.3-201ENST00000561909 1096 ntBASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 AC005332.1-201ENST00000577698 1310 ntBASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.94■□□□□ 0.62
NCKAP1Q9Y2A7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 KRT8P3-201ENST00000519669 1449 ntBASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 AL023284.2-201ENST00000405850 579 ntBASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCKAP1Q9Y2A7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 MIR3180-5-201ENST00000583743 153 ntBASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 AC093458.2-201ENST00000623150 629 ntBASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1Q9Y2A7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms