Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.55■□□□□ 0.4
UBQLN3Q9H347 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 AC004951.3-201ENST00000418645 1148 ntBASIC17.54■□□□□ 0.4
UBQLN3Q9H347 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 AC008040.2-201ENST00000461049 708 ntBASIC17.54■□□□□ 0.4
UBQLN3Q9H347 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 LINC01023-201ENST00000606054 436 ntBASIC17.54■□□□□ 0.4
UBQLN3Q9H347 AP000692.2-201ENST00000608391 879 ntBASIC17.54■□□□□ 0.4
UBQLN3Q9H347 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
UBQLN3Q9H347 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 NEFHP1-201ENST00000412845 2629 ntBASIC17.53■□□□□ 0.4
UBQLN3Q9H347 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 MIR1238-201ENST00000408483 83 ntBASIC17.53■□□□□ 0.4
UBQLN3Q9H347 ECEL1P3-201ENST00000427961 737 ntBASIC17.53■□□□□ 0.4
UBQLN3Q9H347 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 AP005242.2-201ENST00000580065 1175 ntBASIC17.53■□□□□ 0.4
UBQLN3Q9H347 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 AC011298.2-201ENST00000617989 482 ntBASIC17.53■□□□□ 0.4
UBQLN3Q9H347 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 KRT8P9-201ENST00000558927 1449 ntBASIC17.53■□□□□ 0.4
UBQLN3Q9H347 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBQLN3Q9H347 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 AC006333.2-201ENST00000607957 2099 ntBASIC17.52■□□□□ 0.4
UBQLN3Q9H347 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 AL390955.1-201ENST00000428694 934 ntBASIC17.52■□□□□ 0.4
UBQLN3Q9H347 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 AC091390.4-202ENST00000476426 537 ntBASIC17.52■□□□□ 0.4
UBQLN3Q9H347 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.52■□□□□ 0.4
UBQLN3Q9H347 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 AC133561.5-201ENST00000635547 218 ntBASIC17.52■□□□□ 0.4
UBQLN3Q9H347 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.52■□□□□ 0.4
UBQLN3Q9H347 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBQLN3Q9H347 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
UBQLN3Q9H347 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
UBQLN3Q9H347 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
UBQLN3Q9H347 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
UBQLN3Q9H347 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
UBQLN3Q9H347 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms