Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 AC090192.1-201ENST00000517740 490 ntBASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 PRKY-204ENST00000533551 1019 ntBASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 AC068587.9-201ENST00000641814 219 ntBASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 RCC2P6-201ENST00000526625 1557 ntBASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHACTR1Q9C0D0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 AC126763.1-201ENST00000552015 2118 ntBASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 POM121L13P-201ENST00000422362 380 ntBASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 UNC93B4-201ENST00000505679 747 ntBASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 MYC-208ENST00000641036 567 ntBASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 MTMR9LP-203ENST00000426597 1545 ntBASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHACTR1Q9C0D0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms