Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 FEM1AP3-201ENST00000403722 1741 ntBASIC22.3■■□□□ 1.16
CDK5RAP2Q96SN8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDK5RAP2Q96SN8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDK5RAP2Q96SN8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDK5RAP2Q96SN8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC22.3■■□□□ 1.16
CDK5RAP2Q96SN8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDK5RAP2Q96SN8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CDK5RAP2Q96SN8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDK5RAP2Q96SN8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDK5RAP2Q96SN8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDK5RAP2Q96SN8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC22.29■■□□□ 1.16
CDK5RAP2Q96SN8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDK5RAP2Q96SN8 AL032819.2-201ENST00000624543 2162 ntBASIC22.29■■□□□ 1.16
CDK5RAP2Q96SN8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CDK5RAP2Q96SN8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDK5RAP2Q96SN8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDK5RAP2Q96SN8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.29■■□□□ 1.16
CDK5RAP2Q96SN8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.29■■□□□ 1.16
CDK5RAP2Q96SN8 MIR3917-201ENST00000580971 93 ntBASIC22.29■■□□□ 1.16
CDK5RAP2Q96SN8 AC024243.1-201ENST00000609234 778 ntBASIC22.29■■□□□ 1.16
CDK5RAP2Q96SN8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDK5RAP2Q96SN8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.29■■□□□ 1.16
CDK5RAP2Q96SN8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDK5RAP2Q96SN8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDK5RAP2Q96SN8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CDK5RAP2Q96SN8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 AC079602.3-201ENST00000623931 403 ntBASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 AL109659.2-201ENST00000606809 1674 ntBASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 AL136038.3-201ENST00000561909 1096 ntBASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 AC068587.9-201ENST00000641814 219 ntBASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP2Q96SN8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 AL049812.1-201ENST00000432563 2267 ntBASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 AC104390.1-201ENST00000555663 520 ntBASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CDK5RAP2Q96SN8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 AL391807.1-203ENST00000604392 2365 ntBASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 Z98044.1-201ENST00000632503 1764 ntBASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 KRT18P41-201ENST00000518924 1277 ntBASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 AC010240.3-201ENST00000607688 395 ntBASIC22.26■■□□□ 1.15
CDK5RAP2Q96SN8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms