Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 AC008556.1-201ENST00000610908 2040 ntBASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 KRT18P31-201ENST00000506277 1292 ntBASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 AC090616.6-201ENST00000582640 721 ntBASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
CRAMP1Q96RY5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 MIR564-202ENST00000385049 94 ntBASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 FOSL1P1-201ENST00000511041 816 ntBASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 AC005332.3-201ENST00000589904 676 ntBASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 AL390719.2-201ENST00000606993 987 ntBASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CRAMP1Q96RY5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 TEX21P-204ENST00000641479 1693 ntBASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CRAMP1Q96RY5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 AC079781.3-201ENST00000449110 356 ntBASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 AP003733.1-201ENST00000491725 852 ntBASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 Z82202.1-201ENST00000623446 1880 ntBASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CRAMP1Q96RY5 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.11■■□□□ 1.29
CRAMP1Q96RY5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CRAMP1Q96RY5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CRAMP1Q96RY5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CRAMP1Q96RY5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CRAMP1Q96RY5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.11■■□□□ 1.29
CRAMP1Q96RY5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.11■■□□□ 1.29
CRAMP1Q96RY5 LINC01711-201ENST00000598340 967 ntBASIC23.11■■□□□ 1.29
CRAMP1Q96RY5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CRAMP1Q96RY5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms