Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 TSPY17P-201ENST00000450329 467 ntBASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 C2orf69P3-201ENST00000565542 1120 ntBASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 MTMR9LP-203ENST00000426597 1545 ntBASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 CYP2D8P-201ENST00000433633 1490 ntBASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 AC004408.2-201ENST00000623613 2777 ntBASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 RCC2P3-201ENST00000418112 1537 ntBASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 EGLN1P1-201ENST00000531623 762 ntBASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 BX088651.1-201ENST00000540551 451 ntBASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 AC010947.1-201ENST00000623454 693 ntBASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.54■□□□□ 0.4
CTHRC1Q96CG8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 GPAT2P1-201ENST00000444924 1672 ntBASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 AL023284.2-201ENST00000405850 579 ntBASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 AC073912.3-201ENST00000624414 853 ntBASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CTHRC1Q96CG8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTHRC1Q96CG8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTHRC1Q96CG8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.52■□□□□ 0.4
CTHRC1Q96CG8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTHRC1Q96CG8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.52■□□□□ 0.4
CTHRC1Q96CG8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CTHRC1Q96CG8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.52■□□□□ 0.4
CTHRC1Q96CG8 AL138781.2-201ENST00000617896 1843 ntBASIC17.52■□□□□ 0.4
CTHRC1Q96CG8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTHRC1Q96CG8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTHRC1Q96CG8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTHRC1Q96CG8 CCR12P-201ENST00000446203 998 ntBASIC17.52■□□□□ 0.4
CTHRC1Q96CG8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.52■□□□□ 0.4
CTHRC1Q96CG8 AC116562.4-202ENST00000641738 218 ntBASIC17.52■□□□□ 0.4
CTHRC1Q96CG8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms