Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM54Q969K7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM54Q969K7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM54Q969K7 Z98044.1-201ENST00000632503 1764 ntBASIC16.69■□□□□ 0.26
TMEM54Q969K7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM54Q969K7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM54Q969K7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM54Q969K7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TMEM54Q969K7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM54Q969K7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
TMEM54Q969K7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TMEM54Q969K7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
TMEM54Q969K7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM54Q969K7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM54Q969K7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.68■□□□□ 0.26
TMEM54Q969K7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.68■□□□□ 0.26
TMEM54Q969K7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 AC066615.1-201ENST00000640911 628 ntBASIC16.68■□□□□ 0.26
TMEM54Q969K7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TMEM54Q969K7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM54Q969K7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 AL138781.2-201ENST00000617896 1843 ntBASIC16.68■□□□□ 0.26
TMEM54Q969K7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEM54Q969K7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM54Q969K7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM54Q969K7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM54Q969K7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM54Q969K7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM54Q969K7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM54Q969K7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 AC093827.2-201ENST00000512654 315 ntBASIC16.67■□□□□ 0.26
TMEM54Q969K7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 FITM1-202ENST00000559294 800 ntBASIC16.67■□□□□ 0.26
TMEM54Q969K7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 AP000525.1-201ENST00000608286 694 ntBASIC16.67■□□□□ 0.26
TMEM54Q969K7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM54Q969K7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM54Q969K7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM54Q969K7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM54Q969K7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
TMEM54Q969K7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM54Q969K7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM54Q969K7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM54Q969K7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM54Q969K7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM54Q969K7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM54Q969K7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 AC008622.2-201ENST00000617006 1229 ntBASIC16.66■□□□□ 0.26
TMEM54Q969K7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM54Q969K7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.66■□□□□ 0.26
TMEM54Q969K7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM54Q969K7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM54Q969K7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM54Q969K7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM54Q969K7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM54Q969K7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM54Q969K7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms