Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.32■□□□□ 0.84
HERVK_113Q902F9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HERVK_113Q902F9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
HERVK_113Q902F9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.32■□□□□ 0.84
HERVK_113Q902F9 AC133561.1-201ENST00000568600 2415 ntBASIC20.32■□□□□ 0.84
HERVK_113Q902F9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 KRT18P23-201ENST00000435622 1283 ntBASIC20.31■□□□□ 0.84
HERVK_113Q902F9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 GPR32P1-201ENST00000601788 811 ntBASIC20.31■□□□□ 0.84
HERVK_113Q902F9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HERVK_113Q902F9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.3■□□□□ 0.84
HERVK_113Q902F9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 AC092183.1-201ENST00000469884 875 ntBASIC20.3■□□□□ 0.84
HERVK_113Q902F9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HERVK_113Q902F9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 NSUN5P1-202ENST00000421140 1535 ntBASIC20.29■□□□□ 0.84
HERVK_113Q902F9 NSUN5P2-203ENST00000457352 1529 ntBASIC20.29■□□□□ 0.84
HERVK_113Q902F9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 RN7SL606P-201ENST00000472779 293 ntBASIC20.29■□□□□ 0.84
HERVK_113Q902F9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.29■□□□□ 0.84
HERVK_113Q902F9 AL592071.1-201ENST00000611956 408 ntBASIC20.29■□□□□ 0.84
HERVK_113Q902F9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 SDHAP1-207ENST00000440850 2000 ntBASIC20.29■□□□□ 0.84
HERVK_113Q902F9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
HERVK_113Q902F9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 HOXB1-202ENST00000577092 1414 ntBASIC20.28■□□□□ 0.84
HERVK_113Q902F9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 MIR1233-2-201ENST00000408138 82 ntBASIC20.28■□□□□ 0.84
HERVK_113Q902F9 MIR1233-1-201ENST00000408722 82 ntBASIC20.28■□□□□ 0.84
HERVK_113Q902F9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 GUSBP12-201ENST00000513727 720 ntBASIC20.28■□□□□ 0.84
HERVK_113Q902F9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 AC092865.5-201ENST00000545435 363 ntBASIC20.28■□□□□ 0.84
HERVK_113Q902F9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HERVK_113Q902F9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.27■□□□□ 0.84
HERVK_113Q902F9 PKD1P6-201ENST00000343738 4769 ntBASIC20.27■□□□□ 0.84
HERVK_113Q902F9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms