Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 AL596275.1-201ENST00000423464 877 ntBASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 AC011506.1-201ENST00000474329 610 ntBASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 DGCR10-201ENST00000609839 495 ntBASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 REXO1L10P-201ENST00000615707 1290 ntBASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 REXO1L12P-201ENST00000622156 912 ntBASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 AP003071.4-201ENST00000562276 1284 ntBASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.59■□□□□ 0.57
HMGCLL1Q8TB92 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HMGCLL1Q8TB92 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGCLL1Q8TB92 AL390961.4-201ENST00000623958 2535 ntBASIC18.58■□□□□ 0.57
HMGCLL1Q8TB92 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.58■□□□□ 0.57
HMGCLL1Q8TB92 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 TSPY21P-201ENST00000433481 731 ntBASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 AC091390.4-202ENST00000476426 537 ntBASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 AC011298.2-201ENST00000617989 482 ntBASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.58■□□□□ 0.56
HMGCLL1Q8TB92 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 AP000692.2-201ENST00000608391 879 ntBASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 AL512353.2-201ENST00000448759 1962 ntBASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCLL1Q8TB92 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 AC090164.3-201ENST00000610780 2143 ntBASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCLL1Q8TB92 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms