Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RTL9Q8NET4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RTL9Q8NET4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.32■■□□□ 1.32
RTL9Q8NET4 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.32■■□□□ 1.32
RTL9Q8NET4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RTL9Q8NET4 FEM1AP3-201ENST00000403722 1741 ntBASIC23.32■■□□□ 1.32
RTL9Q8NET4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RTL9Q8NET4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RTL9Q8NET4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.31■■□□□ 1.32
RTL9Q8NET4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RTL9Q8NET4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RTL9Q8NET4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC23.31■■□□□ 1.32
RTL9Q8NET4 AC092597.1-201ENST00000487352 616 ntBASIC23.31■■□□□ 1.32
RTL9Q8NET4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC23.31■■□□□ 1.32
RTL9Q8NET4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC23.31■■□□□ 1.32
RTL9Q8NET4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RTL9Q8NET4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RTL9Q8NET4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.31■■□□□ 1.32
RTL9Q8NET4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
RTL9Q8NET4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RTL9Q8NET4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RTL9Q8NET4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.31■■□□□ 1.32
RTL9Q8NET4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
RTL9Q8NET4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RTL9Q8NET4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.31■■□□□ 1.32
RTL9Q8NET4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RTL9Q8NET4 HOXB1-202ENST00000577092 1414 ntBASIC23.31■■□□□ 1.32
RTL9Q8NET4 RCC2P3-201ENST00000418112 1537 ntBASIC23.3■■□□□ 1.32
RTL9Q8NET4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RTL9Q8NET4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
RTL9Q8NET4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTL9Q8NET4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTL9Q8NET4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTL9Q8NET4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.3■■□□□ 1.32
RTL9Q8NET4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTL9Q8NET4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC23.3■■□□□ 1.32
RTL9Q8NET4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.3■■□□□ 1.32
RTL9Q8NET4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.3■■□□□ 1.32
RTL9Q8NET4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.3■■□□□ 1.32
RTL9Q8NET4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RTL9Q8NET4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RTL9Q8NET4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
RTL9Q8NET4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTL9Q8NET4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RTL9Q8NET4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTL9Q8NET4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RTL9Q8NET4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTL9Q8NET4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RTL9Q8NET4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.29■■□□□ 1.32
RTL9Q8NET4 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.29■■□□□ 1.32
RTL9Q8NET4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC23.29■■□□□ 1.32
RTL9Q8NET4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC23.29■■□□□ 1.32
RTL9Q8NET4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC23.29■■□□□ 1.32
RTL9Q8NET4 AC112497.1-201ENST00000624824 639 ntBASIC23.29■■□□□ 1.32
RTL9Q8NET4 KRT8P32-201ENST00000512863 1461 ntBASIC23.29■■□□□ 1.32
RTL9Q8NET4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTL9Q8NET4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTL9Q8NET4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC23.29■■□□□ 1.32
RTL9Q8NET4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTL9Q8NET4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RTL9Q8NET4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTL9Q8NET4 IRX1P1-201ENST00000438849 1838 ntBASIC23.29■■□□□ 1.32
RTL9Q8NET4 UBQLN4P1-201ENST00000461599 1801 ntBASIC23.29■■□□□ 1.32
RTL9Q8NET4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTL9Q8NET4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTL9Q8NET4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTL9Q8NET4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC23.28■■□□□ 1.32
RTL9Q8NET4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTL9Q8NET4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTL9Q8NET4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTL9Q8NET4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.28■■□□□ 1.32
RTL9Q8NET4 AL645929.1-201ENST00000420084 975 ntBASIC23.28■■□□□ 1.32
RTL9Q8NET4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.28■■□□□ 1.32
RTL9Q8NET4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC23.28■■□□□ 1.32
RTL9Q8NET4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.28■■□□□ 1.32
RTL9Q8NET4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RTL9Q8NET4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTL9Q8NET4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC23.28■■□□□ 1.32
RTL9Q8NET4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTL9Q8NET4 KRT8P7-201ENST00000533003 1432 ntBASIC23.28■■□□□ 1.32
RTL9Q8NET4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTL9Q8NET4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RTL9Q8NET4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.28■■□□□ 1.32
RTL9Q8NET4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.28■■□□□ 1.32
RTL9Q8NET4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTL9Q8NET4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RTL9Q8NET4 AC141586.3-201ENST00000562166 1838 ntBASIC23.28■■□□□ 1.32
RTL9Q8NET4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTL9Q8NET4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTL9Q8NET4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC23.27■■□□□ 1.32
RTL9Q8NET4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTL9Q8NET4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.27■■□□□ 1.32
RTL9Q8NET4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
RTL9Q8NET4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RTL9Q8NET4 HLA-F-220ENST00000434407 884 ntBASIC23.27■■□□□ 1.32
RTL9Q8NET4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC23.27■■□□□ 1.32
RTL9Q8NET4 MIR3917-201ENST00000580971 93 ntBASIC23.27■■□□□ 1.32
RTL9Q8NET4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTL9Q8NET4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTL9Q8NET4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms