Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC28.67■■■□□ 2.18
CDC42BPAQ5VT25 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CDC42BPAQ5VT25 BET1L-206ENST00000486280 665 ntTSL 3 BASIC28.67■■■□□ 2.18
CDC42BPAQ5VT25 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CDC42BPAQ5VT25 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CDC42BPAQ5VT25 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC28.67■■■□□ 2.18
CDC42BPAQ5VT25 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC28.67■■■□□ 2.18
CDC42BPAQ5VT25 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
CDC42BPAQ5VT25 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC28.67■■■□□ 2.18
CDC42BPAQ5VT25 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CDC42BPAQ5VT25 LINC01006-201ENST00000333319 2292 ntBASIC28.67■■■□□ 2.18
CDC42BPAQ5VT25 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC28.66■■■□□ 2.18
CDC42BPAQ5VT25 AKR1C7P-201ENST00000305623 895 ntBASIC28.66■■■□□ 2.18
CDC42BPAQ5VT25 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC28.66■■■□□ 2.18
CDC42BPAQ5VT25 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC28.66■■■□□ 2.18
CDC42BPAQ5VT25 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC28.66■■■□□ 2.18
CDC42BPAQ5VT25 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDC42BPAQ5VT25 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
CDC42BPAQ5VT25 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDC42BPAQ5VT25 PWWP2AP1-201ENST00000429776 2273 ntBASIC28.66■■■□□ 2.18
CDC42BPAQ5VT25 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC28.66■■■□□ 2.18
CDC42BPAQ5VT25 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
CDC42BPAQ5VT25 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDC42BPAQ5VT25 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC28.66■■■□□ 2.18
CDC42BPAQ5VT25 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDC42BPAQ5VT25 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC28.65■■■□□ 2.18
CDC42BPAQ5VT25 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPAQ5VT25 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
CDC42BPAQ5VT25 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPAQ5VT25 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPAQ5VT25 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPAQ5VT25 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPAQ5VT25 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPAQ5VT25 AP000867.3-201ENST00000524675 377 ntBASIC28.65■■■□□ 2.18
CDC42BPAQ5VT25 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC28.65■■■□□ 2.18
CDC42BPAQ5VT25 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPAQ5VT25 AL157384.1-201ENST00000445995 2473 ntBASIC28.64■■■□□ 2.18
CDC42BPAQ5VT25 AC112907.3-201ENST00000577781 2400 ntBASIC28.64■■■□□ 2.18
CDC42BPAQ5VT25 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC28.64■■■□□ 2.18
CDC42BPAQ5VT25 AC125437.2-201ENST00000625180 2167 ntBASIC28.64■■■□□ 2.18
CDC42BPAQ5VT25 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC28.64■■■□□ 2.18
CDC42BPAQ5VT25 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CDC42BPAQ5VT25 KRT8P7-201ENST00000533003 1432 ntBASIC28.64■■■□□ 2.18
CDC42BPAQ5VT25 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CDC42BPAQ5VT25 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC28.64■■■□□ 2.18
CDC42BPAQ5VT25 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC28.64■■■□□ 2.18
CDC42BPAQ5VT25 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
CDC42BPAQ5VT25 AL592071.1-201ENST00000611956 408 ntBASIC28.64■■■□□ 2.18
CDC42BPAQ5VT25 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CDC42BPAQ5VT25 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
CDC42BPAQ5VT25 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC28.64■■■□□ 2.18
CDC42BPAQ5VT25 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 AC104819.1-201ENST00000504587 486 ntBASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 AC106795.1-205ENST00000512851 1056 ntBASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 AC004263.2-201ENST00000617183 678 ntBASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 KRT18P31-201ENST00000506277 1292 ntBASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 AP002469.2-201ENST00000531724 424 ntBASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 IL11-204ENST00000590625 1028 ntTSL 2 BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC28.63■■■□□ 2.17
CDC42BPAQ5VT25 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CDC42BPAQ5VT25 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDC42BPAQ5VT25 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDC42BPAQ5VT25 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDC42BPAQ5VT25 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDC42BPAQ5VT25 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDC42BPAQ5VT25 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
CDC42BPAQ5VT25 AL022342.1-201ENST00000400363 863 ntBASIC28.62■■■□□ 2.17
CDC42BPAQ5VT25 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDC42BPAQ5VT25 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC28.62■■■□□ 2.17
CDC42BPAQ5VT25 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CDC42BPAQ5VT25 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDC42BPAQ5VT25 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC28.61■■■□□ 2.17
CDC42BPAQ5VT25 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms