Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.04■■□□□ 1.28
TTC39AQ5SRH9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TTC39AQ5SRH9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TTC39AQ5SRH9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TTC39AQ5SRH9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TTC39AQ5SRH9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 AL049597.2-201ENST00000565575 961 ntBASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 AC139887.4-201ENST00000607877 719 ntBASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 CR769767.2-201ENST00000622735 460 ntBASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.01■■□□□ 1.27
TTC39AQ5SRH9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TTC39AQ5SRH9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
TTC39AQ5SRH9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
TTC39AQ5SRH9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23■■□□□ 1.27
TTC39AQ5SRH9 AL512353.2-201ENST00000448759 1962 ntBASIC23■■□□□ 1.27
TTC39AQ5SRH9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23■■□□□ 1.27
TTC39AQ5SRH9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23■■□□□ 1.27
TTC39AQ5SRH9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
TTC39AQ5SRH9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC23■■□□□ 1.27
TTC39AQ5SRH9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TTC39AQ5SRH9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TTC39AQ5SRH9 AC117947.1-201ENST00000427448 529 ntBASIC23■■□□□ 1.27
TTC39AQ5SRH9 MCCD1P1-208ENST00000445732 328 ntBASIC23■■□□□ 1.27
TTC39AQ5SRH9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
TTC39AQ5SRH9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC23■■□□□ 1.27
TTC39AQ5SRH9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC23■■□□□ 1.27
TTC39AQ5SRH9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TTC39AQ5SRH9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC23■■□□□ 1.27
TTC39AQ5SRH9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TTC39AQ5SRH9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TTC39AQ5SRH9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TTC39AQ5SRH9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TTC39AQ5SRH9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TTC39AQ5SRH9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TTC39AQ5SRH9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23■■□□□ 1.27
TTC39AQ5SRH9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms