Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHROOM1Q2M3G4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SHROOM1Q2M3G4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
SHROOM1Q2M3G4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHROOM1Q2M3G4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHROOM1Q2M3G4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHROOM1Q2M3G4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHROOM1Q2M3G4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.11■■□□□ 1.13
SHROOM1Q2M3G4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHROOM1Q2M3G4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.11■■□□□ 1.13
SHROOM1Q2M3G4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHROOM1Q2M3G4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SHROOM1Q2M3G4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 NPAP1P7-201ENST00000613027 823 ntBASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 RCC2P3-201ENST00000418112 1537 ntBASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHROOM1Q2M3G4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 AL645929.1-201ENST00000420084 975 ntBASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 AC092119.3-201ENST00000612618 583 ntBASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SHROOM1Q2M3G4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SHROOM1Q2M3G4 IRX1P1-201ENST00000438849 1838 ntBASIC22.08■■□□□ 1.13
SHROOM1Q2M3G4 AC007952.6-201ENST00000573168 2673 ntBASIC22.08■■□□□ 1.13
SHROOM1Q2M3G4 AC003957.1-201ENST00000625108 2673 ntBASIC22.08■■□□□ 1.13
SHROOM1Q2M3G4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SHROOM1Q2M3G4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC22.08■■□□□ 1.13
SHROOM1Q2M3G4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC22.08■■□□□ 1.13
SHROOM1Q2M3G4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC22.08■■□□□ 1.13
SHROOM1Q2M3G4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC22.08■■□□□ 1.13
SHROOM1Q2M3G4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SHROOM1Q2M3G4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC22.08■■□□□ 1.13
SHROOM1Q2M3G4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.08■■□□□ 1.13
SHROOM1Q2M3G4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC22.08■■□□□ 1.13
SHROOM1Q2M3G4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.08■■□□□ 1.13
SHROOM1Q2M3G4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
SHROOM1Q2M3G4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SHROOM1Q2M3G4 AL512353.2-201ENST00000448759 1962 ntBASIC22.08■■□□□ 1.12
SHROOM1Q2M3G4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
SHROOM1Q2M3G4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
SHROOM1Q2M3G4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.12
SHROOM1Q2M3G4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SHROOM1Q2M3G4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
SHROOM1Q2M3G4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.08■■□□□ 1.12
SHROOM1Q2M3G4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.08■■□□□ 1.12
SHROOM1Q2M3G4 AC073130.3-201ENST00000624389 2278 ntBASIC22.08■■□□□ 1.12
SHROOM1Q2M3G4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHROOM1Q2M3G4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SHROOM1Q2M3G4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHROOM1Q2M3G4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.07■■□□□ 1.12
SHROOM1Q2M3G4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC22.07■■□□□ 1.12
SHROOM1Q2M3G4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHROOM1Q2M3G4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHROOM1Q2M3G4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHROOM1Q2M3G4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.07■■□□□ 1.12
SHROOM1Q2M3G4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SHROOM1Q2M3G4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHROOM1Q2M3G4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHROOM1Q2M3G4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHROOM1Q2M3G4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SHROOM1Q2M3G4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms