Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 SCARNA2-201ENST00000458748 420 ntBASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 AL356488.2-201ENST00000602755 427 ntBASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 VENTXP7-201ENST00000475503 772 ntBASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 AC134684.3-201ENST00000641758 218 ntBASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RSPO4Q2I0M5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 MED15P5-201ENST00000423150 992 ntBASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 AC018712.1-201ENST00000455767 687 ntBASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 AP003733.1-201ENST00000491725 852 ntBASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 SART3-203ENST00000546611 1184 ntBASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 AC116407.3-201ENST00000623905 1129 ntBASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 GPAT2P1-201ENST00000444924 1672 ntBASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RSPO4Q2I0M5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 MINOS1P3-201ENST00000457048 203 ntBASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 AC092364.2-202ENST00000597012 1073 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms