Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.67■□□□□ 0.26
NKX6-1P78426 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.67■□□□□ 0.26
NKX6-1P78426 Z85996.1-201ENST00000494644 937 ntBASIC16.67■□□□□ 0.26
NKX6-1P78426 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.67■□□□□ 0.26
NKX6-1P78426 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.67■□□□□ 0.26
NKX6-1P78426 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
NKX6-1P78426 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.67■□□□□ 0.26
NKX6-1P78426 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.67■□□□□ 0.26
NKX6-1P78426 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-1P78426 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NKX6-1P78426 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-1P78426 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-1P78426 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-1P78426 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-1P78426 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.67■□□□□ 0.26
NKX6-1P78426 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.66■□□□□ 0.26
NKX6-1P78426 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.66■□□□□ 0.26
NKX6-1P78426 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NKX6-1P78426 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NKX6-1P78426 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NKX6-1P78426 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 AC011506.1-201ENST00000474329 610 ntBASIC16.66■□□□□ 0.26
NKX6-1P78426 KRT18P56-201ENST00000507275 550 ntBASIC16.66■□□□□ 0.26
NKX6-1P78426 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.66■□□□□ 0.26
NKX6-1P78426 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NKX6-1P78426 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NKX6-1P78426 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
NKX6-1P78426 AL160286.2-201ENST00000567150 934 ntBASIC16.66■□□□□ 0.26
NKX6-1P78426 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NKX6-1P78426 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NKX6-1P78426 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
NKX6-1P78426 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.66■□□□□ 0.26
NKX6-1P78426 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.66■□□□□ 0.26
NKX6-1P78426 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NKX6-1P78426 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX6-1P78426 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NKX6-1P78426 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-1P78426 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-1P78426 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-1P78426 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-1P78426 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-1P78426 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.65■□□□□ 0.26
NKX6-1P78426 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.65■□□□□ 0.26
NKX6-1P78426 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-1P78426 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-1P78426 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-1P78426 RCC2P6-201ENST00000526625 1557 ntBASIC16.65■□□□□ 0.26
NKX6-1P78426 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NKX6-1P78426 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-1P78426 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.65■□□□□ 0.26
NKX6-1P78426 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NKX6-1P78426 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.65■□□□□ 0.26
NKX6-1P78426 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.65■□□□□ 0.26
NKX6-1P78426 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.65■□□□□ 0.26
NKX6-1P78426 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.65■□□□□ 0.26
NKX6-1P78426 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.65■□□□□ 0.26
NKX6-1P78426 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.65■□□□□ 0.26
NKX6-1P78426 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-1P78426 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.65■□□□□ 0.26
NKX6-1P78426 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-1P78426 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
NKX6-1P78426 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-1P78426 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX6-1P78426 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
NKX6-1P78426 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
NKX6-1P78426 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-1P78426 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.64■□□□□ 0.25
NKX6-1P78426 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-1P78426 LETM1P2-201ENST00000597330 2178 ntBASIC16.64■□□□□ 0.25
NKX6-1P78426 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-1P78426 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-1P78426 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.64■□□□□ 0.25
NKX6-1P78426 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-1P78426 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.64■□□□□ 0.25
NKX6-1P78426 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.64■□□□□ 0.25
NKX6-1P78426 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.64■□□□□ 0.25
NKX6-1P78426 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.64■□□□□ 0.25
NKX6-1P78426 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.64■□□□□ 0.25
NKX6-1P78426 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.64■□□□□ 0.25
NKX6-1P78426 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.64■□□□□ 0.25
NKX6-1P78426 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.64■□□□□ 0.25
NKX6-1P78426 AC130371.2-201ENST00000619443 611 ntBASIC16.64■□□□□ 0.25
NKX6-1P78426 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.64■□□□□ 0.25
NKX6-1P78426 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.64■□□□□ 0.25
NKX6-1P78426 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NKX6-1P78426 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms