Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDKN2DP55273 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKN2DP55273 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDKN2DP55273 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKN2DP55273 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKN2DP55273 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKN2DP55273 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKN2DP55273 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CDKN2DP55273 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.71■□□□□ 0.59
CDKN2DP55273 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.71■□□□□ 0.59
CDKN2DP55273 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKN2DP55273 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKN2DP55273 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.71■□□□□ 0.59
CDKN2DP55273 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.71■□□□□ 0.59
CDKN2DP55273 AC098590.1-201ENST00000468126 897 ntBASIC18.71■□□□□ 0.59
CDKN2DP55273 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKN2DP55273 PRSS44-201ENST00000515154 1146 ntBASIC18.71■□□□□ 0.59
CDKN2DP55273 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.71■□□□□ 0.59
CDKN2DP55273 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.71■□□□□ 0.59
CDKN2DP55273 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKN2DP55273 AL031985.4-201ENST00000642138 673 ntBASIC18.71■□□□□ 0.59
CDKN2DP55273 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDKN2DP55273 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKN2DP55273 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDKN2DP55273 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKN2DP55273 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKN2DP55273 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKN2DP55273 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CDKN2DP55273 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.71■□□□□ 0.58
CDKN2DP55273 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.58
CDKN2DP55273 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.7■□□□□ 0.58
CDKN2DP55273 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKN2DP55273 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.7■□□□□ 0.58
CDKN2DP55273 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKN2DP55273 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKN2DP55273 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDKN2DP55273 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKN2DP55273 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDKN2DP55273 AC011506.1-201ENST00000474329 610 ntBASIC18.7■□□□□ 0.58
CDKN2DP55273 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDKN2DP55273 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.7■□□□□ 0.58
CDKN2DP55273 AC026271.3-201ENST00000571884 352 ntBASIC18.7■□□□□ 0.58
CDKN2DP55273 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.7■□□□□ 0.58
CDKN2DP55273 AC011298.2-201ENST00000617989 482 ntBASIC18.7■□□□□ 0.58
CDKN2DP55273 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CDKN2DP55273 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.7■□□□□ 0.58
CDKN2DP55273 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDKN2DP55273 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDKN2DP55273 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKN2DP55273 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.7■□□□□ 0.58
CDKN2DP55273 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKN2DP55273 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.7■□□□□ 0.58
CDKN2DP55273 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CDKN2DP55273 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDKN2DP55273 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CDKN2DP55273 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.69■□□□□ 0.58
CDKN2DP55273 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKN2DP55273 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKN2DP55273 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDKN2DP55273 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKN2DP55273 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.69■□□□□ 0.58
CDKN2DP55273 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDKN2DP55273 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.69■□□□□ 0.58
CDKN2DP55273 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKN2DP55273 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.69■□□□□ 0.58
CDKN2DP55273 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.69■□□□□ 0.58
CDKN2DP55273 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.69■□□□□ 0.58
CDKN2DP55273 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.69■□□□□ 0.58
CDKN2DP55273 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.69■□□□□ 0.58
CDKN2DP55273 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.69■□□□□ 0.58
CDKN2DP55273 AC130371.2-201ENST00000619443 611 ntBASIC18.69■□□□□ 0.58
CDKN2DP55273 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.69■□□□□ 0.58
CDKN2DP55273 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKN2DP55273 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.69■□□□□ 0.58
CDKN2DP55273 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.69■□□□□ 0.58
CDKN2DP55273 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDKN2DP55273 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKN2DP55273 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKN2DP55273 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKN2DP55273 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDKN2DP55273 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKN2DP55273 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CDKN2DP55273 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKN2DP55273 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKN2DP55273 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKN2DP55273 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKN2DP55273 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKN2DP55273 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKN2DP55273 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKN2DP55273 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKN2DP55273 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKN2DP55273 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.68■□□□□ 0.58
CDKN2DP55273 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CDKN2DP55273 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKN2DP55273 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKN2DP55273 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDKN2DP55273 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
CDKN2DP55273 MESTP1-201ENST00000404287 994 ntBASIC18.68■□□□□ 0.58
CDKN2DP55273 FAM197Y1-201ENST00000421178 764 ntBASIC18.68■□□□□ 0.58
CDKN2DP55273 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms