Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNA3P22001 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.22■■□□□ 1.31
KCNA3P22001 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
KCNA3P22001 KRT18P67-201ENST00000432816 1264 ntBASIC23.22■■□□□ 1.31
KCNA3P22001 GPR32P1-201ENST00000601788 811 ntBASIC23.22■■□□□ 1.31
KCNA3P22001 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KCNA3P22001 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
KCNA3P22001 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNA3P22001 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.22■■□□□ 1.31
KCNA3P22001 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNA3P22001 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
KCNA3P22001 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNA3P22001 EMD-201ENST00000369835 966 ntTSL 3 BASIC23.21■■□□□ 1.31
KCNA3P22001 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC23.21■■□□□ 1.31
KCNA3P22001 NUS1P2-201ENST00000417358 873 ntBASIC23.21■■□□□ 1.31
KCNA3P22001 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNA3P22001 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC23.21■■□□□ 1.31
KCNA3P22001 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC23.21■■□□□ 1.31
KCNA3P22001 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC23.21■■□□□ 1.31
KCNA3P22001 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNA3P22001 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNA3P22001 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
KCNA3P22001 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNA3P22001 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
KCNA3P22001 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNA3P22001 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
KCNA3P22001 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNA3P22001 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNA3P22001 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KCNA3P22001 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KCNA3P22001 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
KCNA3P22001 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
KCNA3P22001 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
KCNA3P22001 IGHGP-201ENST00000390555 1178 ntBASIC23.2■■□□□ 1.3
KCNA3P22001 BX842568.4-201ENST00000421222 227 ntBASIC23.2■■□□□ 1.3
KCNA3P22001 AC005104.2-201ENST00000427818 678 ntBASIC23.2■■□□□ 1.3
KCNA3P22001 KRT18P23-201ENST00000435622 1283 ntBASIC23.2■■□□□ 1.3
KCNA3P22001 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC23.2■■□□□ 1.3
KCNA3P22001 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
KCNA3P22001 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KCNA3P22001 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC23.2■■□□□ 1.3
KCNA3P22001 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC23.2■■□□□ 1.3
KCNA3P22001 AL049840.3-201ENST00000602669 611 ntBASIC23.2■■□□□ 1.3
KCNA3P22001 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNA3P22001 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNA3P22001 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNA3P22001 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
KCNA3P22001 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC23.19■■□□□ 1.3
KCNA3P22001 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KCNA3P22001 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
KCNA3P22001 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNA3P22001 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.19■■□□□ 1.3
KCNA3P22001 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC23.19■■□□□ 1.3
KCNA3P22001 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
KCNA3P22001 LINC02084-201ENST00000606069 1096 ntBASIC23.19■■□□□ 1.3
KCNA3P22001 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.19■■□□□ 1.3
KCNA3P22001 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC23.19■■□□□ 1.3
KCNA3P22001 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
KCNA3P22001 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
KCNA3P22001 AC020907.5-201ENST00000624372 1936 ntBASIC23.19■■□□□ 1.3
KCNA3P22001 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNA3P22001 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
KCNA3P22001 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
KCNA3P22001 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC23.19■■□□□ 1.3
KCNA3P22001 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
KCNA3P22001 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNA3P22001 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.18■■□□□ 1.3
KCNA3P22001 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNA3P22001 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNA3P22001 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
KCNA3P22001 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNA3P22001 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNA3P22001 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNA3P22001 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
KCNA3P22001 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC23.18■■□□□ 1.3
KCNA3P22001 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNA3P22001 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC23.18■■□□□ 1.3
KCNA3P22001 RPL13AP23-201ENST00000480739 586 ntBASIC23.18■■□□□ 1.3
KCNA3P22001 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC23.18■■□□□ 1.3
KCNA3P22001 TERC-201ENST00000602385 541 ntBASIC23.18■■□□□ 1.3
KCNA3P22001 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
KCNA3P22001 AC055717.3-201ENST00000622967 595 ntBASIC23.18■■□□□ 1.3
KCNA3P22001 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC23.18■■□□□ 1.3
KCNA3P22001 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.18■■□□□ 1.3
KCNA3P22001 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNA3P22001 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNA3P22001 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNA3P22001 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNA3P22001 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KCNA3P22001 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNA3P22001 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNA3P22001 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
KCNA3P22001 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNA3P22001 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC23.17■■□□□ 1.3
KCNA3P22001 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC23.17■■□□□ 1.3
KCNA3P22001 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KCNA3P22001 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNA3P22001 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC23.17■■□□□ 1.3
KCNA3P22001 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC23.17■■□□□ 1.3
KCNA3P22001 PIN1-206ENST00000587625 878 ntTSL 2 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms